RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MGAT5Q09328 741 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 PTPN21Q16825 1174 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 TNS3Q68CZ2 1445 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 ARHGEF18Q6ZSZ5 1173 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 Q7L0L9 218 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 GCDHQ92947 438 aaPredicted RBP6.63□□□□□ -1.35
CCDC171-207ENST00000478913 LPPQ93052 612 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 FUBP3Q96I24 572 aaKnown RBP eCLIP6.63□□□□□ -1.35
CCDC171-207ENST00000478913 OSBPL6Q9BZF3 934 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 XYLT2Q9H1B5 865 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 PARD6AQ9NPB6 346 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 DUOX2Q9NRD8 1548 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 INVSQ9Y283 1065 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 NR2E1Q9Y466 385 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 SPEF1Q9Y4P9 236 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 SLC4A7Q9Y6M7 1214 aa6.63□□□□□ -1.35
CCDC171-207ENST00000478913 TNKSO95271 1327 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 ARHGAP6O43182 974 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 OSMP13725 252 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 SURF1Q15526 300 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 MUM1Q2TAK8 710 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 KCNK18Q7Z418 384 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 FRMD5Q7Z6J6 570 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 PNMA8AQ86V59 439 aaPredicted RBP6.62□□□□□ -1.35
CCDC171-207ENST00000478913 OR14K1Q8NGZ2 314 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 FAXDC2Q96IV6 333 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 UIMC1Q96RL1 719 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 FDXACB1Q9BRP7 624 aaPredicted RBP6.62□□□□□ -1.35
CCDC171-207ENST00000478913 IFT122Q9HBG6 1241 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 SLC52A1Q9NWF4 448 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 CTDP1Q9Y5B0 961 aaPredicted RBP6.62□□□□□ -1.35
CCDC171-207ENST00000478913 RBM8AQ9Y5S9 174 aaKnown RBP6.62□□□□□ -1.35
CCDC171-207ENST00000478913 GPR45Q9Y5Y3 372 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 MRFAP1Q9Y605 127 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 NALCNQ8IZF0 1738 aa6.62□□□□□ -1.35
CCDC171-207ENST00000478913 TNRC6CQ9HCJ0 1690 aaKnown RBP6.61□□□□□ -1.35
CCDC171-207ENST00000478913 HFM1A2PYH4 1435 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 XPOTO43592 962 aaKnown RBP6.61□□□□□ -1.35
CCDC171-207ENST00000478913 ALDH1L1O75891 902 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 RBP3P10745 1247 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 CCND1P24385 295 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 MTNR1BP49286 362 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 NEK2P51955 445 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 SLC5A3P53794 718 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 CCT2P78371 535 aaKnown RBP6.61□□□□□ -1.35
CCDC171-207ENST00000478913 ACAP2Q15057 778 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 TBR1Q16650 682 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 RNF151Q2KHN1 245 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 PLEKHG6Q3KR16 790 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 LILRA6Q6PI73 481 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 CLEC14AQ86T13 490 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 ZBTB46Q86UZ6 589 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 UNC5BQ8IZJ1 945 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 PPP1R14CQ8TAE6 165 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 TSPEARQ8WU66 669 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 CHMP4CQ96CF2 233 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 SLC7A6OSQ96CW6 309 aaPredicted RBP6.61□□□□□ -1.35
CCDC171-207ENST00000478913 ACE2Q9BYF1 805 aaPredicted RBP6.61□□□□□ -1.35
CCDC171-207ENST00000478913 ADAM7Q9H2U9 754 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 JADE2Q9NQC1 790 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 DUSP10Q9Y6W6 482 aa6.61□□□□□ -1.35
CCDC171-207ENST00000478913 PLEKHH2Q8IVE3 1493 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 CCDC144AA2RUR9 1427 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 ARHGAP31Q2M1Z3 1444 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 CNOT4O95628 575 aaKnown RBP6.6□□□□□ -1.35
CCDC171-207ENST00000478913 LY86O95711 162 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 S100BP04271 92 aaPredicted RBP6.6□□□□□ -1.35
CCDC171-207ENST00000478913 INHBBP09529 407 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 AGXTP21549 392 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 RAC3P60763 192 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 PPP2CBP62714 309 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 PPP2CAP67775 309 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 CD69Q07108 199 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 TCIRG1Q13488 830 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 NFYCQ13952 458 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 PCBP2Q15366 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
CCDC171-207ENST00000478913 ODR4Q5SWX8 454 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 UBXN11Q5T124 520 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 MBNL2Q5VZF2 373 aaKnown RBP6.6□□□□□ -1.35
CCDC171-207ENST00000478913 CTU1Q7Z7A3 348 aaKnown RBP6.6□□□□□ -1.35
CCDC171-207ENST00000478913 PLA2G15Q8NCC3 412 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 SSH1Q8WYL5 1049 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 PAWRQ96IZ0 340 aaKnown RBP6.6□□□□□ -1.35
CCDC171-207ENST00000478913 C14orf93Q9H972 538 aaKnown RBP6.6□□□□□ -1.35
CCDC171-207ENST00000478913 ZBTB21Q9ULJ3 1066 aa6.6□□□□□ -1.35
CCDC171-207ENST00000478913 LRRIQ1Q96JM4 1722 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 ARHGEF10O15013 1369 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 ZNF536O15090 1300 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 CHD8Q9HCK8 2581 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 KLHL33A6NCF5 533 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 C2orf78A6NCI8 922 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 FZD9O00144 591 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 LAMTOR5O43504 91 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 GAAP10253 952 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 MAP2K2P36507 400 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 BPIFB4P59827 614 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 KRT85P78386 507 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 TTF1Q15361 905 aaPredicted RBP6.59□□□□□ -1.35
CCDC171-207ENST00000478913 KRT40Q6A162 431 aa6.59□□□□□ -1.35
CCDC171-207ENST00000478913 PIK3C3Q8NEB9 887 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms