RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 ATXN7L2Q5T6C5 722 aaPredicted RBP4.62□□□□□ -1.67
VLDLR-204ENST00000478776 BTNL9Q6UXG8 535 aa4.62□□□□□ -1.67
VLDLR-204ENST00000478776 FRMD7Q6ZUT3 714 aa4.62□□□□□ -1.67
VLDLR-204ENST00000478776 LHFPL2Q6ZUX7 228 aa4.62□□□□□ -1.67
VLDLR-204ENST00000478776 ARHGEF25Q86VW2 580 aa4.62□□□□□ -1.67
VLDLR-204ENST00000478776 AFAP1L2Q8N4X5 818 aa4.62□□□□□ -1.67
VLDLR-204ENST00000478776 PAWRQ96IZ0 340 aaKnown RBP4.62□□□□□ -1.67
VLDLR-204ENST00000478776 EVLQ9UI08 416 aaPredicted RBP4.62□□□□□ -1.67
VLDLR-204ENST00000478776 LCHNA4D1U4 455 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 MYADML2A6NDP7 307 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 EYA4O95677 639 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 IGLV2-14P01704 120 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 CHN2P52757 468 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 PHC1P78364 1004 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 ATP13A4Q4VNC1 1196 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 ABHD15Q6UXT9 468 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 ZNF384Q8TF68 577 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 ALOXE3Q9BYJ1 711 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 MS4A5Q9H3V2 200 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 IFT22Q9H7X7 185 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 EMC7Q9NPA0 242 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 TBCCD1Q9NVR7 557 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 LRIT1Q9P2V4 623 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 MAST3O60307 1309 aa4.61□□□□□ -1.67
VLDLR-204ENST00000478776 ARHGEF17Q96PE2 2063 aaPredicted RBP4.61□□□□□ -1.67
VLDLR-204ENST00000478776 DRGXA6NNA5 263 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 ZEB2O60315 1214 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 CFIP05156 583 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 PTPN7P35236 360 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 CLRN1P58418 232 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 ZNF362Q5T0B9 420 aaPredicted RBP4.6□□□□□ -1.67
VLDLR-204ENST00000478776 PAPD7Q5XG87 772 aaKnown RBP4.6□□□□□ -1.67
VLDLR-204ENST00000478776 TSHZ3Q63HK5 1081 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 MAPKAPK5Q8IW41 473 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 OR56A1Q8NGH5 318 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 ZNF480Q8WV37 535 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 Q96MF0 132 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 TTC1Q99614 292 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 CASS4Q9NQ75 786 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 FRMD4BQ9Y2L6 1034 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 NOC2LQ9Y3T9 749 aaKnown RBP4.6□□□□□ -1.67
VLDLR-204ENST00000478776 PPP2R3BQ9Y5P8 575 aa4.6□□□□□ -1.67
VLDLR-204ENST00000478776 ANKRD62A6NC57 917 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 MARCH11A6NNE9 402 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 PJA2O43164 708 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 KDM1AO60341 852 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 PHF2O75151 1096 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 SNRPA1P09661 255 aaKnown RBP4.59□□□□□ -1.67
VLDLR-204ENST00000478776 CTSSP25774 331 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 CANXP27824 592 aaKnown RBP4.59□□□□□ -1.67
VLDLR-204ENST00000478776 CRHR1P34998 444 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 FLT3LGP49771 235 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 MANFP55145 182 aaKnown RBP4.59□□□□□ -1.67
VLDLR-204ENST00000478776 AMPD3Q01432 767 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 STAT4Q14765 748 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 ZNF169Q14929 603 aaPredicted RBP4.59□□□□□ -1.67
VLDLR-204ENST00000478776 TERF2Q15554 542 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 MFSD14BQ5SR56 506 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 PRAMEF14Q5SWL7 426 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 AGAP9Q5VTM2 703 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 BROXQ5VW32 411 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 Q6ZNX1 250 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 MED25Q71SY5 747 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 DDX42Q86XP3 938 aaKnown RBP eCLIP4.59□□□□□ -1.67
VLDLR-204ENST00000478776 RHOT2Q8IXI1 618 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 TMEM132CQ8N3T6 1108 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 FAM98AQ8NCA5 519 aaKnown RBP4.59□□□□□ -1.67
VLDLR-204ENST00000478776 SLC5A5Q92911 643 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 RNF31Q96EP0 1072 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 CEP95Q96GE4 821 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 SLC29A3Q9BZD2 475 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 TMX1Q9H3N1 280 aa4.59□□□□□ -1.67
VLDLR-204ENST00000478776 RPTORQ8N122 1335 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 TMEM127O75204 238 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 RARRES1P49788 294 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 RAP2BP61225 183 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 MRPS35P82673 323 aaKnown RBP4.58□□□□□ -1.68
VLDLR-204ENST00000478776 FAM47AQ5JRC9 791 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 RRP12Q5JTH9 1297 aaKnown RBP4.58□□□□□ -1.68
VLDLR-204ENST00000478776 METRNLQ641Q3 311 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 GPR149Q86SP6 731 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 ATL2Q8NHH9 583 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 SMG7Q92540 1137 aaKnown RBP4.58□□□□□ -1.68
VLDLR-204ENST00000478776 HEPHQ9BQS7 1158 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 TMPRSS11EQ9UL52 423 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 DMTF1Q9Y222 760 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 CDY2AQ9Y6F7 541 aa4.58□□□□□ -1.68
VLDLR-204ENST00000478776 SALL3Q9BXA9 1300 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.57□□□□□ -1.68
VLDLR-204ENST00000478776 BRINP1O60477 761 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 LPLP06858 475 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 CPEP16870 476 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 ITGB6P18564 788 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 ABCG1P45844 678 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 LGALS4P56470 323 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 SIM1P81133 766 aaPredicted RBP4.57□□□□□ -1.68
VLDLR-204ENST00000478776 TMPRSS15P98073 1019 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 TRIM25Q14258 630 aaKnown RBP4.57□□□□□ -1.68
VLDLR-204ENST00000478776 FOXR2Q6PJQ5 311 aa4.57□□□□□ -1.68
VLDLR-204ENST00000478776 FAM180AQ6UWF9 173 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms