RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 DTX3LQ8TDB6 740 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 NRG4Q8WWG1 115 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 SNF8Q96H20 258 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 GPR101Q96P66 508 aaPredicted RBP14.31□□□□□ -0.12
DFFB-209ENST00000477548 TIPINQ9BVW5 301 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 FAM192AQ9GZU8 254 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 DNAJC18Q9H819 358 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 PDP2Q9P2J9 529 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 LGALS13Q9UHV8 139 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 ROBO3Q96MS0 1386 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 USP17L5A8MUK1 530 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 GCNT3O95395 438 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 VPS41P49754 854 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 SPARCL1Q14515 664 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 CLEC4GQ6UXB4 293 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 DSTYKQ6XUX3 929 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 GET4Q7L5D6 327 aaPredicted RBP14.31□□□□□ -0.12
DFFB-209ENST00000477548 STMN2Q93045 179 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 PWWP2AQ96N64 755 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 EYA3Q99504 573 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 SYT11Q9BT88 431 aa14.31□□□□□ -0.12
DFFB-209ENST00000477548 MAP3K7O43318 606 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 TCEA3O75764 348 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 UBTFL6P0CB48 400 aaPredicted RBP14.3□□□□□ -0.12
DFFB-209ENST00000477548 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
DFFB-209ENST00000477548 RFC4P35249 363 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 SLC12A3P55017 1021 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 SLC34A1Q06495 639 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 PABPC4Q13310 644 aaKnown RBP eCLIP14.3□□□□□ -0.12
DFFB-209ENST00000477548 GIT2Q14161 759 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 SGO2Q562F6 1265 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 FAM186BQ8IYM0 893 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 AGPAT1Q99943 283 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 REEP2Q9BRK0 252 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 VCX3BQ9H321 246 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 KIAA1551Q9HCM1 1747 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 VCX3AQ9NNX9 186 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 ANAPC5Q9UJX4 755 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 ACTL7BQ9Y614 415 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 ASTN1O14525 1302 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 TP73O15350 636 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 MAGEB2O15479 319 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 ASMTLO95671 621 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 CHRNB2P17787 502 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 NAT1P18440 290 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 STAT3P40763 770 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 GPC5P78333 572 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 KPNB1Q14974 876 aaKnown RBP14.3□□□□□ -0.12
DFFB-209ENST00000477548 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
DFFB-209ENST00000477548 RHBDF2Q6PJF5 856 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 TGFBRAP1Q8WUH2 860 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 C10orf82Q8WW14 230 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 SETDB2Q96T68 719 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 NDNQ99608 321 aa14.3□□□□□ -0.12
DFFB-209ENST00000477548 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 MEIS1O00470 390 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 CLDN3O15551 220 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 EDF1O60869 148 aaKnown RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 MED24O75448 989 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 RXRBP28702 533 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 HADHBP55084 474 aaKnown RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 SIX1Q15475 284 aaPredicted RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 ZC2HC1CQ53FD0 456 aaPredicted RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 NLRP9Q7RTR0 991 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 FBXO33Q7Z6M2 555 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 PRUNE1Q86TP1 453 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 MTDHQ86UE4 582 aaKnown RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 SLC20A1Q8WUM9 679 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 PTPRN2Q92932 1015 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 MKL1Q969V6 931 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 OPTNQ96CV9 577 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 C9orf72Q96LT7 481 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 MIPEPQ99797 713 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 CADM1Q9BY67 442 aaKnown RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 TLE6Q9H808 572 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 ZNF287Q9HBT7 754 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 UBN1Q9NPG3 1134 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 ATF2P15336 505 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 SMARCA1P28370 1054 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 HIBADHP31937 336 aaKnown RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 ADCY8P40145 1251 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 FMO5P49326 533 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 KCNA1Q09470 495 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 SDCCAG8Q86SQ7 713 aaPredicted RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 MCUR1Q96AQ8 359 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 DDX50Q9BQ39 737 aaKnown RBP14.29□□□□□ -0.12
DFFB-209ENST00000477548 GPR88Q9GZN0 384 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 LRRC19Q9H756 370 aa14.29□□□□□ -0.12
DFFB-209ENST00000477548 HNRNPCL1O60812 293 aaKnown RBP14.28□□□□□ -0.12
DFFB-209ENST00000477548 CCDC22O60826 627 aa14.28□□□□□ -0.12
DFFB-209ENST00000477548 ZCCHC18P0CG32 403 aa14.28□□□□□ -0.12
DFFB-209ENST00000477548 PSMC2P35998 433 aaKnown RBP14.28□□□□□ -0.12
DFFB-209ENST00000477548 STAT4Q14765 748 aa14.28□□□□□ -0.12
DFFB-209ENST00000477548 ACSBG2Q5FVE4 666 aa14.28□□□□□ -0.12
DFFB-209ENST00000477548 TMEM63BQ5T3F8 832 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms