RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ALKAL1Q6UXT8 129 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 GUF1Q8N442 669 aaKnown RBP14.3□□□□□ -0.12
TOP3A-205ENST00000477508 GSTCDQ8NEC7 633 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 SNX27Q96L92 541 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 FAM161BQ96MY7 647 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 PRDM12Q9H4Q4 367 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 CERS4Q9HA82 394 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 SPG21Q9NZD8 308 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 LMCD1Q9NZU5 365 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 CNTN3Q9P232 1028 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 PUF60Q9UHX1 559 aaKnown RBP14.3□□□□□ -0.12
TOP3A-205ENST00000477508 CPSF3Q9UKF6 684 aaKnown RBP14.3□□□□□ -0.12
TOP3A-205ENST00000477508 CHD7Q9P2D1 2997 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 TTC26A0AVF1 554 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 PDXKO00764 312 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 XPOTO43592 962 aaKnown RBP14.29□□□□□ -0.12
TOP3A-205ENST00000477508 EXTL3O43909 919 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 MBD3O95983 291 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 ADRB2P07550 413 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 GALTP07902 379 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 POU3F3P20264 500 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-205ENST00000477508 AFF1P51825 1210 aaKnown RBP14.29□□□□□ -0.12
TOP3A-205ENST00000477508 PLCB3Q01970 1234 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 PPP2R3AQ06190 1150 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 DSC1Q08554 894 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 TUSC3Q13454 348 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 SLC10A6Q3KNW5 377 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 COBLL1Q53SF7 1204 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 ZNF658Q5TYW1 1059 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-205ENST00000477508 Q7L0L9 218 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 ZNF280BQ86YH2 543 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 C12orf56Q8IXR9 622 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 KLHL23Q8NBE8 558 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 TMEM174Q8WUU8 243 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 COLEC11Q9BWP8 271 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 ASB7Q9H672 318 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 AGPAT3Q9NRZ7 376 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 MIOSQ9NXC5 875 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
TOP3A-205ENST00000477508 TDRD15B5MCY1 1934 aaKnown RBP14.29□□□□□ -0.12
TOP3A-205ENST00000477508 SMIM28A0A1B0GU29 152 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 TISP43B9A030 160 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 PTGESO14684 152 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 TGFB1I1O43294 461 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 FGF18O76093 207 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 DDHD2O94830 711 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 IL18RAPO95256 599 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 ACOT2P49753 483 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 STIM1Q13586 685 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 MYBPC2Q14324 1141 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 BMS1Q14692 1282 aaKnown RBP14.28□□□□□ -0.12
TOP3A-205ENST00000477508 ENOX2Q16206 610 aaKnown RBP14.28□□□□□ -0.12
TOP3A-205ENST00000477508 PDE12Q6L8Q7 609 aaKnown RBP14.28□□□□□ -0.12
TOP3A-205ENST00000477508 COLGALT2Q8IYK4 626 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 SLC39A11Q8N1S5 342 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 GPD1LQ8N335 351 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 TRIML1Q8N9V2 468 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 DDX27Q96GQ7 796 aaKnown RBP14.28□□□□□ -0.12
TOP3A-205ENST00000477508 TMEM169Q96HH4 297 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 UROC1Q96N76 676 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 PPP1R10Q96QC0 940 aaKnown RBP14.28□□□□□ -0.12
TOP3A-205ENST00000477508 CDX2Q99626 313 aaPredicted RBP14.28□□□□□ -0.12
TOP3A-205ENST00000477508 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 CLSTN2Q9H4D0 955 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 KIAA1468Q9P260 1216 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 PLAGL2Q9UPG8 496 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 DERAQ9Y315 318 aa14.28□□□□□ -0.12
TOP3A-205ENST00000477508 ZNF233A6NK53 670 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 CALUO43852 315 aaPredicted RBP14.27□□□□□ -0.13
TOP3A-205ENST00000477508 CXCL8P10145 99 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 PTMSP20962 102 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 RPL9P32969 192 aaKnown RBP14.27□□□□□ -0.13
TOP3A-205ENST00000477508 OR1G1P47890 313 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 SLC11A1P49279 550 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 SURF1Q15526 300 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 SEZ6Q53EL9 994 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 SPRED2Q7Z698 418 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 NT5DC4Q86YG4 428 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 SLC9A9Q8IVB4 645 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 GUCD1Q96NT3 240 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 FAM213AQ9BRX8 229 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 IKZF4Q9H2S9 585 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 KCTD10Q9H3F6 313 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 HSPBP1Q9NZL4 362 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 HCSTQ9UBK5 93 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 DNAJB4Q9UDY4 337 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 TRAF3IP3Q9Y228 551 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 TRIP11Q15643 1979 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 KIAA1671Q9BY89 1806 aa14.27□□□□□ -0.13
TOP3A-205ENST00000477508 TRANK1O15050 2925 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 EPOPA6NHQ4 379 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 LACTBL1A8MY62 500 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 NRP1O14786 923 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 ITGB1P05556 798 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 CYP3A5P20815 502 aa14.26□□□□□ -0.13
TOP3A-205ENST00000477508 RPL13P26373 211 aaKnown RBP14.26□□□□□ -0.13
TOP3A-205ENST00000477508 TNFSF9P41273 254 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms