RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 FAM84BQ96KN1 310 aaPredicted RBP6.87□□□□□ -1.31
CDKN1B-204ENST00000477087 C8orf49Q96NF6 230 aa6.87□□□□□ -1.31
CDKN1B-204ENST00000477087 KRTAP4-11Q9BYQ6 195 aa6.87□□□□□ -1.31
CDKN1B-204ENST00000477087 KRTAP4-2Q9BYR5 136 aa6.87□□□□□ -1.31
CDKN1B-204ENST00000477087 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDKN1B-204ENST00000477087 HMG20BQ9P0W2 317 aa6.87□□□□□ -1.31
CDKN1B-204ENST00000477087 CBLCQ9ULV8 474 aa6.87□□□□□ -1.31
CDKN1B-204ENST00000477087 MED23Q9ULK4 1368 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 PRAMEF25A6NGN4 478 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 MAN2B1O00754 1011 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 AMY2AP04746 511 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 SRGNP10124 158 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 INSRRP14616 1297 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 AMY2BP19961 511 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 ADORA1P30542 326 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 EPHB4P54760 987 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 KRT32Q14532 448 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 ALX1Q15699 326 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 CPZQ66K79 652 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 CWC27Q6UX04 472 aaKnown RBP6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 CIR1Q86X95 450 aaPredicted RBP6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 SPATA5Q8NB90 893 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 ZSWIM2Q8NEG5 633 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 APPBP2Q92624 585 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 FSD1Q9BTV5 496 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 PPP4R1LQ9P1A2 415 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 SFMBT1Q9UHJ3 866 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 DENND2AQ9ULE3 1009 aa6.86□□□□□ -1.31
CDKN1B-204ENST00000477087 RGPD3A6NKT7 1758 aaPredicted RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 ANKRD36CQ5JPF3 1778 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 RGPD4Q7Z3J3 1758 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 XDHP47989 1333 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 SALL1Q9NSC2 1324 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 CCDC163A0A0D9SF12 145 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 FAM90A27PA6NNH2 459 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 GOLIM4O00461 696 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 IL18BPO95998 194 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 ZKSCAN1P17029 563 aaPredicted RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 PSMA5P28066 241 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 HIBADHP31937 336 aaKnown RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 ADD2P35612 726 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 MCAMP43121 646 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 JAM2P57087 298 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 MAP3K12Q12852 859 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 EZH2Q15910 746 aaKnown RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 ZNF568Q3ZCX4 644 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 SLFN13Q68D06 897 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 SMIM5Q71RC9 77 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 GGNQ86UU5 652 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 CERS3Q8IU89 383 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 REXO1L1PQ8IX06 675 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 CISD2Q8N5K1 135 aaKnown RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 TDRD7Q8NHU6 1098 aaKnown RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 THAP3Q8WTV1 239 aaPredicted RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 RPGRQ92834 1020 aaKnown RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 MASTLQ96GX5 879 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 AJUBAQ96IF1 538 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 MAGEB10Q96LZ2 347 aaPredicted RBP6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 MRIQ9BWK5 157 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 VPS33BQ9H267 617 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 CTNNA3Q9UI47 895 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 JAG2Q9Y219 1238 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 ATP6V0A2Q9Y487 856 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 LRP5O75197 1615 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 BCORQ6W2J9 1755 aa6.85□□□□□ -1.31
CDKN1B-204ENST00000477087 ZMYM6O95789 1325 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 CLASP2O75122 1294 aaKnown RBP6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 HMGB1P09429 215 aaKnown RBP6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 GNAT2P19087 354 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 PHKA1P46020 1223 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 PUM1Q14671 1186 aaKnown RBP eCLIP6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 VPS53Q5VIR6 699 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 SPTY2D1Q68D10 685 aaPredicted RBP6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 GPR155Q7Z3F1 870 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 ZGPATQ8N5A5 531 aaKnown RBP6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 WDR66Q8TBY9 1149 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 CHMP4CQ96CF2 233 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 FAM227BQ96M60 508 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 SSBP3Q9BWW4 388 aaPredicted RBP6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 IL25Q9H293 177 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 ST6GALNAC2Q9UJ37 374 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 MYRFQ9Y2G1 1151 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 TAF1LQ8IZX4 1826 aa6.84□□□□□ -1.31
CDKN1B-204ENST00000477087 SCN7AQ01118 1682 aa6.84□□□□□ -1.32
CDKN1B-204ENST00000477087 AFDNP55196 1824 aaKnown RBP6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 A0A0D9SFI3 127 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 KCNK3O14649 394 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 NPHP1O15259 732 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 CUTAO60888 179 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 MAP4K4O95819 1239 aaPredicted RBP6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 MMP10P09238 476 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 IL1R1P14778 569 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 PTGS1P23219 599 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 CSF2RBP32927 897 aa6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 USP10Q14694 798 aaKnown RBP6.83□□□□□ -1.32
CDKN1B-204ENST00000477087 WDR48Q8TAF3 677 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms