RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 LINC01599Q8WXQ3 324 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 PABPC5Q96DU9 382 aaKnown RBP19.25■□□□□ 0.67
SREBF1-211ENST00000476994 BICD1Q96G01 975 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 ANP32EQ9BTT0 268 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 CDT1Q9H211 546 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 RNF216Q9NWF9 866 aaPredicted RBP19.25■□□□□ 0.67
SREBF1-211ENST00000476994 MYO7AQ13402 2215 aa19.25■□□□□ 0.67
SREBF1-211ENST00000476994 BICDL2A1A5D9 508 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 C5orf67F2Z3F1 127 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 N4BP3O15049 544 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 CALUO43852 315 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-211ENST00000476994 NR3C1P04150 777 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 BMPR1AP36894 532 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 MYBPC2Q14324 1141 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 TMEM31Q5JXX7 168 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 NOTUMQ6P988 496 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 FAM43BQ6ZT52 329 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-211ENST00000476994 FAM200AQ8TCP9 573 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 PPP2R3CQ969Q6 453 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 CCDC51Q96ER9 411 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 FBXL18Q96ME1 805 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 PLVAPQ9BX97 442 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 LRFN2Q9ULH4 789 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 PIN4Q9Y237 131 aaKnown RBP19.24■□□□□ 0.67
SREBF1-211ENST00000476994 HCN4Q9Y3Q4 1203 aa19.24■□□□□ 0.67
SREBF1-211ENST00000476994 FNDC1Q4ZHG4 1894 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-211ENST00000476994 TDRD15B5MCY1 1934 aaKnown RBP19.23■□□□□ 0.67
SREBF1-211ENST00000476994 IKBKBO14920 756 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 NFX1Q12986 1120 aaKnown RBP19.23■□□□□ 0.67
SREBF1-211ENST00000476994 NOLC1Q14978 699 aaKnown RBP eCLIP19.23■□□□□ 0.67
SREBF1-211ENST00000476994 TCEAL5Q5H9L2 206 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 SPATA1Q5VX52 437 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 SLFN12LQ6IEE8 588 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 RTN4RL1Q86UN2 441 aaPredicted RBP19.23■□□□□ 0.67
SREBF1-211ENST00000476994 IRF2BP1Q8IU81 584 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 AOPEPQ8N6M6 819 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 TSG101Q99816 390 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 TRAIPQ9BWF2 469 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 EIF2AQ9BY44 585 aaKnown RBP19.23■□□□□ 0.67
SREBF1-211ENST00000476994 NAT10Q9H0A0 1025 aaKnown RBP19.23■□□□□ 0.67
SREBF1-211ENST00000476994 EPHX3Q9H6B9 360 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 CHST12Q9NRB3 414 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 HSPBP1Q9NZL4 362 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 ANKFY1Q9P2R3 1169 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 ATG2AQ2TAZ0 1938 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 KIAA1671Q9BY89 1806 aa19.23■□□□□ 0.67
SREBF1-211ENST00000476994 MCF2P10911 925 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 NR2F2P24468 414 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 CASP4P49662 377 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 FKBP3Q00688 224 aaKnown RBP19.22■□□□□ 0.67
SREBF1-211ENST00000476994 MYL5Q02045 173 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 ZNF568Q3ZCX4 644 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 ZBTB41Q5SVQ8 909 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 ARMCX5Q6P1M9 558 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 SLC27A1Q6PCB7 646 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 CRELD2Q6UXH1 353 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-211ENST00000476994 NPAS4Q8IUM7 802 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 GJD3Q8N144 294 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 CEP120Q8N960 986 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.22■□□□□ 0.67
SREBF1-211ENST00000476994 CLDND1Q9NY35 253 aa19.22■□□□□ 0.67
SREBF1-211ENST00000476994 GRXCR2A6NFK2 248 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 H3BQ06 376 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-211ENST00000476994 CLDN3O15551 220 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 MEFVO15553 781 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-211ENST00000476994 DGKIO75912 1065 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 CYP2J2P51589 502 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 MCCD1P59942 119 aaPredicted RBP19.21■□□□□ 0.67
SREBF1-211ENST00000476994 CDKAL1Q5VV42 579 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 LUZP1Q86V48 1076 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 CSGALNACT2Q8N6G5 542 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 POMGNT1Q8WZA1 660 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 CLP1Q92989 425 aaKnown RBP19.21■□□□□ 0.67
SREBF1-211ENST00000476994 FAM122AQ96E09 287 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 EEF2KMTQ96G04 330 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 BORCS6Q96GS4 357 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 CEP63Q96MT8 703 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 RBSNQ9H1K0 784 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 PCIF1Q9H4Z3 704 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 AGO2Q9UKV8 859 aaKnown RBP19.21■□□□□ 0.67
SREBF1-211ENST00000476994 NFE2L3Q9Y4A8 694 aa19.21■□□□□ 0.67
SREBF1-211ENST00000476994 KIAA0391O15091 583 aaKnown RBP19.2■□□□□ 0.66
SREBF1-211ENST00000476994 OGTO15294 1046 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 AKAP3O75969 853 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 NPTXRO95502 500 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 ADRB2P07550 413 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 IL9P15248 144 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 ZNF18P17022 549 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 ADAM9Q13443 819 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 DCAF4L1Q3SXM0 396 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 ZBTB33Q86T24 672 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 CMTR2Q8IYT2 770 aaKnown RBP19.2■□□□□ 0.66
SREBF1-211ENST00000476994 XXYLT1Q8NBI6 393 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 SMG8Q8ND04 991 aaKnown RBP19.2■□□□□ 0.66
SREBF1-211ENST00000476994 ZNF689Q96CS4 500 aaPredicted RBP19.2■□□□□ 0.66
SREBF1-211ENST00000476994 SAAL1Q96ER3 474 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 LRFN3Q9BTN0 628 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 MSTO1Q9BUK6 570 aa19.2■□□□□ 0.66
SREBF1-211ENST00000476994 SRRTQ9BXP5 876 aaKnown RBP19.2■□□□□ 0.66
SREBF1-211ENST00000476994 SAMSN1Q9NSI8 373 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms