RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 HNRNPH3P31942 346 aaKnown RBP31.22■■■□□ 2.59
VEGFA-211ENST00000476772 MTF1Q14872 753 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 NOTUMQ6P988 496 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 TMTC1Q8IUR5 882 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 RPF1Q9H9Y2 349 aaKnown RBP31.22■■■□□ 2.59
VEGFA-211ENST00000476772 APEX2Q9UBZ4 518 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 NOD1Q9Y239 953 aa31.22■■■□□ 2.59
VEGFA-211ENST00000476772 C4BPAP04003 597 aaKnown RBP31.21■■■□□ 2.59
VEGFA-211ENST00000476772 CXCL8P10145 99 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 KCNJ6P48051 423 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 MGAT3Q09327 533 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 PTK7Q13308 1070 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 DCAF4L1Q3SXM0 396 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 RAD9BQ6WBX8 426 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 GPIHBP1Q8IV16 184 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 FBXL13Q8NEE6 735 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 SENP6Q9GZR1 1112 aaPredicted RBP31.21■■■□□ 2.59
VEGFA-211ENST00000476772 RNF208Q9H0X6 261 aa31.21■■■□□ 2.59
VEGFA-211ENST00000476772 NPTXRO95502 500 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 CHRNA1P02708 482 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 CLTAP09496 248 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 AXLP30530 894 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 THPOP40225 353 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 SURF1Q15526 300 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 ZACNQ401N2 412 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 TDRD10Q5VZ19 366 aaKnown RBP31.2■■■□□ 2.59
VEGFA-211ENST00000476772 PHLDB3Q6NSJ2 640 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 SLC27A1Q6PCB7 646 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 FAM228AQ86W67 206 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 SLC43A3Q8NBI5 491 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 OR5B17Q8NGF7 314 aa31.2■■■□□ 2.59
VEGFA-211ENST00000476772 DHX38Q92620 1227 aaKnown RBP31.2■■■□□ 2.59
VEGFA-211ENST00000476772 NUCKS1Q9H1E3 243 aaKnown RBP31.2■■■□□ 2.59
VEGFA-211ENST00000476772 PIN4Q9Y237 131 aaKnown RBP31.2■■■□□ 2.59
VEGFA-211ENST00000476772 NOC2LQ9Y3T9 749 aaKnown RBP31.2■■■□□ 2.59
VEGFA-211ENST00000476772 A0A0U1RQG5 324 aaPredicted RBP31.19■■■□□ 2.58
VEGFA-211ENST00000476772 DNM1LO00429 736 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 HSPA8P11142 646 aaKnown RBP31.19■■■□□ 2.58
VEGFA-211ENST00000476772 WDR49Q8IV35 697 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 RAB20Q9NX57 234 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 DNAJC12Q9UKB3 198 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 ZNF500O60304 480 aaPredicted RBP31.19■■■□□ 2.58
VEGFA-211ENST00000476772 RAPGEF1Q13905 1077 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 KYAT1Q16773 422 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 SFMBT2Q5VUG0 894 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 SPAG5Q96R06 1193 aa31.19■■■□□ 2.58
VEGFA-211ENST00000476772 EIF2AQ9BY44 585 aaKnown RBP31.19■■■□□ 2.58
VEGFA-211ENST00000476772 UTP3Q9NQZ2 479 aaKnown RBP eCLIP31.19■■■□□ 2.588e-7■■■■□ 20.8
VEGFA-211ENST00000476772 MEFVO15553 781 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-211ENST00000476772 JAM2P57087 298 aa31.18■■■□□ 2.58
VEGFA-211ENST00000476772 BIRC3Q13489 604 aa31.18■■■□□ 2.58
VEGFA-211ENST00000476772 APBB1IPQ7Z5R6 666 aaPredicted RBP31.18■■■□□ 2.58
VEGFA-211ENST00000476772 ARHGEF19Q8IW93 802 aa31.18■■■□□ 2.58
VEGFA-211ENST00000476772 IL18RAPO95256 599 aa31.17■■■□□ 2.58
VEGFA-211ENST00000476772 GRM5P41594 1212 aa31.17■■■□□ 2.58
VEGFA-211ENST00000476772 TRIM71Q2Q1W2 868 aaKnown RBP31.17■■■□□ 2.58
VEGFA-211ENST00000476772 TOGARAM2Q6ZUX3 1019 aa31.17■■■□□ 2.58
VEGFA-211ENST00000476772 CTU1Q7Z7A3 348 aaKnown RBP31.17■■■□□ 2.58
VEGFA-211ENST00000476772 SYN2Q92777 582 aaPredicted RBP31.17■■■□□ 2.58
VEGFA-211ENST00000476772 OGDHLQ9ULD0 1010 aa31.17■■■□□ 2.58
VEGFA-211ENST00000476772 DAAM1Q9Y4D1 1078 aa31.17■■■□□ 2.58
VEGFA-211ENST00000476772 B4GALT4O60513 344 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 CDK17Q00537 523 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 POU5F1Q01860 360 aaKnown RBP31.16■■■□□ 2.58
VEGFA-211ENST00000476772 EFCAB13Q8IY85 973 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 TRPV6Q9H1D0 765 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 MYO6Q9UM54 1294 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 DNAH12Q6ZR08 3092 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 ARVCFO00192 962 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 RPS6KA5O75582 802 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 VNN1O95497 513 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 HLA-DRAP01903 254 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 RFX1P22670 979 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 PIK3CAP42336 1068 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 AP3M2P53677 418 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 ACAP3Q96P50 834 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 MTMR12Q9C0I1 747 aa31.16■■■□□ 2.58
VEGFA-211ENST00000476772 RRAGDQ9NQL2 400 aaPredicted RBP31.16■■■□□ 2.58
VEGFA-211ENST00000476772 MROH7Q68CQ1 1323 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 USP27XA6NNY8 438 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 LACTBL1A8MY62 500 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 SLC10A6Q3KNW5 377 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 DESI2Q9BSY9 194 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 PI4K2AQ9BTU6 479 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 STK33Q9BYT3 514 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 UBE2TQ9NPD8 197 aaPredicted RBP31.15■■■□□ 2.58
VEGFA-211ENST00000476772 AIPL1Q9NZN9 384 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 ARHGAP20Q9P2F6 1191 aa31.15■■■□□ 2.58
VEGFA-211ENST00000476772 PLEKP08567 350 aaPredicted RBP31.14■■■□□ 2.58
VEGFA-211ENST00000476772 TFAMQ00059 246 aaKnown RBP31.14■■■□□ 2.58
VEGFA-211ENST00000476772 DRAP1Q14919 205 aaPredicted RBP31.14■■■□□ 2.58
VEGFA-211ENST00000476772 CCAR2Q8N163 923 aaKnown RBP31.14■■■□□ 2.58
VEGFA-211ENST00000476772 ELMO3Q96BJ8 720 aa31.14■■■□□ 2.58
VEGFA-211ENST00000476772 NT5C1BQ96P26 610 aa31.14■■■□□ 2.58
VEGFA-211ENST00000476772 CCDC94Q9BW85 323 aaPredicted RBP31.14■■■□□ 2.58
VEGFA-211ENST00000476772 ASIC2Q16515 512 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 ARHGAP44Q17R89 818 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 DUOXA2Q1HG44 320 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 UBXN11Q5T124 520 aa31.13■■■□□ 2.57
VEGFA-211ENST00000476772 TRIM6Q9C030 488 aaPredicted RBP31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms