RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CFAP20Q9Y6A4 193 aaKnown RBP6.41□□□□□ -1.38
PTCD3-211ENST00000476215 GOLGA6CA6NDK9 693 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 GOLGA6BA6NDN3 693 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 HOXA3O43365 443 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-211ENST00000476215 GPR32O75388 356 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 RPLP2P05387 115 aaKnown RBP6.4□□□□□ -1.38
PTCD3-211ENST00000476215 GOLGA6DP0CG33 693 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 ATF3P18847 181 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 LPOP22079 712 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-211ENST00000476215 PGS1Q32NB8 556 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 MINDY4Q4G0A6 757 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 C14orf80Q86SX3 495 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 DRC7Q8IY82 874 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 SLC16A11Q8NCK7 471 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 HPS3Q969F9 1004 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 MVB12AQ96EY5 273 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 ZNF512Q96ME7 567 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-211ENST00000476215 SLC12A5Q9H2X9 1139 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 GOLGA6AQ9NYA3 693 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-211ENST00000476215 PCDHB1Q9Y5F3 818 aa6.4□□□□□ -1.38
PTCD3-211ENST00000476215 MYBBP1AQ9BQG0 1328 aaKnown RBP6.4□□□□□ -1.39
PTCD3-211ENST00000476215 CYR61O00622 381 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 SGTAO43765 313 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 FZD7O75084 574 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 AMY1AP04745 511 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 IL2RBP14784 551 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 GUCY1A2P33402 732 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 CDC42EP1Q00587 391 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 ATAT1Q5SQI0 421 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 MFSD14BQ5SR56 506 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 SPTY2D1Q68D10 685 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-211ENST00000476215 ZNF572Q7Z3I7 529 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-211ENST00000476215 TTC7BQ86TV6 843 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 D2HGDHQ8N465 521 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 CEP95Q96GE4 821 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 TMX3Q96JJ7 454 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 MOCS1Q9NZB8 636 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 SH3BP1Q9Y3L3 701 aa6.39□□□□□ -1.39
PTCD3-211ENST00000476215 AMHP03971 560 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 DDCP20711 480 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 FPR1P21462 350 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 FLT3LGP49771 235 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 DSC2Q02487 901 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 TARDBPQ13148 414 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTCD3-211ENST00000476215 SP140Q13342 867 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 USP39Q53GS9 565 aaKnown RBP6.38□□□□□ -1.39
PTCD3-211ENST00000476215 HSP90AB2PQ58FF8 381 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 MFSD5Q6N075 450 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 ZGPATQ8N5A5 531 aaKnown RBP6.38□□□□□ -1.39
PTCD3-211ENST00000476215 IL17DQ8TAD2 202 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 TTC8Q8TAM2 541 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 SLC35G2Q8TBE7 412 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 CACTINQ8WUQ7 758 aaKnown RBP6.38□□□□□ -1.39
PTCD3-211ENST00000476215 EXTL1Q92935 676 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 CLPTM1LQ96KA5 538 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 HDAC5Q9UQL6 1122 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 ACTL7AQ9Y615 435 aa6.38□□□□□ -1.39
PTCD3-211ENST00000476215 WNT10BO00744 389 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 CYP27B1O15528 508 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 RAP2AP10114 183 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 ALOX15P16050 662 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 GNAT2P19087 354 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 PCSK1P29120 753 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 ALDH1A3P47895 512 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 HHEXQ03014 270 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 PTH1RQ03431 593 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 MTM1Q13496 603 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 ELAVL1Q15717 326 aaKnown RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 GFOD2Q3B7J2 385 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 FAM47AQ5JRC9 791 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 AFMIDQ63HM1 303 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 B3GNT9Q6UX72 402 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 GADL1Q6ZQY3 521 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 HTR3DQ70Z44 454 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 XYLT1Q86Y38 959 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 ELOA2Q8IYF1 753 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 CAMKK1Q8N5S9 505 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 NSUN6Q8TEA1 469 aaKnown RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 DIS3LQ8TF46 1054 aaKnown RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 CASKIN2Q8WXE0 1202 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 C1GALT1C1Q96EU7 318 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 SORCS2Q96PQ0 1159 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 TAAR9Q96RI9 348 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 CPPED1Q9BRF8 314 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 HECAQ9UBI9 543 aaPredicted RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 SRRDQ9UH36 339 aa6.37□□□□□ -1.39
PTCD3-211ENST00000476215 RUVBL1Q9Y265 456 aaKnown RBP6.37□□□□□ -1.39
PTCD3-211ENST00000476215 ATRNL1Q5VV63 1379 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 VSTM5A8MXK1 200 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 TEX33O43247 280 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 CTNND1O60716 968 aaKnown RBP6.36□□□□□ -1.39
PTCD3-211ENST00000476215 MFAP3LO75121 409 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 FTLP02792 175 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-211ENST00000476215 GDF5P43026 501 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 ARHGAP29Q52LW3 1261 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 THEMIS2Q5TEJ8 643 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 ANKS6Q68DC2 871 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 APBB1IPQ7Z5R6 666 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-211ENST00000476215 SGMS1Q86VZ5 419 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms