RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 DCAF4L1Q3SXM0 396 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 SPECC1Q5M775 1068 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.95□□□□□ -0.5
CDRT1-205ENST00000475944 MTSS1LQ765P7 747 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 ERMP1Q7Z2K6 904 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 NOSTRINQ8IVI9 506 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 PJA1Q8NG27 643 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 KCNG4Q8TDN1 519 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 POLIQ9UNA4 740 aa11.95□□□□□ -0.5
CDRT1-205ENST00000475944 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 TMEM189-UBE2V1I3L0A0 370 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 CCL16O15467 120 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 POU2F2P09086 479 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 OR52Z1P0C646 297 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 LIG1P18858 919 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 CYP11B2P19099 503 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 MUTP22033 750 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 RBM25P49756 843 aaKnown RBP11.94□□□□□ -0.5
CDRT1-205ENST00000475944 EFNA5P52803 228 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 RAB33AQ14088 237 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 NAB2Q15742 525 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 UVSSAQ2YD98 709 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 HAUS3Q68CZ6 603 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 PADI6Q6TGC4 694 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 PARM1Q6UWI2 310 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 RTL10Q7L3V2 364 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 APBB1IPQ7Z5R6 666 aaPredicted RBP11.94□□□□□ -0.5
CDRT1-205ENST00000475944 C1orf210Q8IVY1 113 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 SLC7A14Q8TBB6 771 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 BSNDQ8WZ55 320 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 FGF13Q92913 245 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 FGF14Q92915 247 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 IFT74Q96LB3 600 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 CCDC113Q9H0I3 377 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 DLGAP2Q9P1A6 1054 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 GDAQ9Y2T3 454 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 R4GN57 208 aa11.94□□□□□ -0.5
CDRT1-205ENST00000475944 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
CDRT1-205ENST00000475944 B3GAT3O94766 335 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 OR1D2P34982 312 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 NEK4P51957 841 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 STARD6P59095 220 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 GPC5P78333 572 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 NTHL1P78549 312 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 AXDND1Q5T1B0 1012 aaPredicted RBP11.93□□□□□ -0.5
CDRT1-205ENST00000475944 ATF7IP2Q5U623 682 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 EEF1DP3Q658K8 133 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 ST13P5Q8NFI4 369 aaPredicted RBP11.93□□□□□ -0.5
CDRT1-205ENST00000475944 KIFAP3Q92845 792 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 UROC1Q96N76 676 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
CDRT1-205ENST00000475944 ADAM12O43184 909 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 EDN1P05305 212 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 SP9P0CG40 484 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 FGFR3P22607 806 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 PFKPQ01813 784 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 GUCY1B3Q02153 619 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 PRKCQQ04759 706 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 MLF2Q15773 248 aaPredicted RBP11.92□□□□□ -0.5
CDRT1-205ENST00000475944 PABPC1LQ4VXU2 614 aaKnown RBP11.92□□□□□ -0.5
CDRT1-205ENST00000475944 GLRA4Q5JXX5 417 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 ANKS3Q6ZW76 656 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 ITFG1Q8TB96 612 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 C8orf76Q96K31 380 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 PPP1R10Q96QC0 940 aaKnown RBP11.92□□□□□ -0.5
CDRT1-205ENST00000475944 RPP25Q9BUL9 199 aaKnown RBP11.92□□□□□ -0.5
CDRT1-205ENST00000475944 FOXQ1Q9C009 403 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 CXCL16Q9H2A7 254 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 KCNH3Q9ULD8 1083 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 USP20Q9Y2K6 914 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 PTPRZ1P23471 2315 aaPredicted RBP11.92□□□□□ -0.5
CDRT1-205ENST00000475944 MYH15Q9Y2K3 1946 aa11.92□□□□□ -0.5
CDRT1-205ENST00000475944 KANSL1LA0AUZ9 987 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 K7ERI5 159 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 NEFLP07196 543 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 CCT6AP40227 531 aaKnown RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 CLCNKBP51801 687 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 YARSP54577 528 aaKnown RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 GNL2Q13823 731 aaKnown RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 ZNF174Q15697 407 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 UPP1Q16831 310 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 RSPO2Q6UXX9 243 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 HINFPQ9BQA5 517 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 DDX23Q9BUQ8 820 aaKnown RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 KIFC3Q9BVG8 833 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 CCDC94Q9BW85 323 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 BCO2Q9BYV7 579 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 BHMT2Q9H2M3 363 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 FOXP1Q9H334 677 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 TOPORSQ9NS56 1045 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 HCFC1R1Q9NWW0 138 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 DNMT3BQ9UBC3 853 aaKnown RBP11.91□□□□□ -0.5
CDRT1-205ENST00000475944 TNFSF13BQ9Y275 285 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 BACE2Q9Y5Z0 518 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 STK24Q9Y6E0 443 aa11.91□□□□□ -0.5
CDRT1-205ENST00000475944 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms