RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 HACE1Q8IYU2 909 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 PNMA5Q96PV4 448 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 POP1Q99575 1024 aaKnown RBP17.13■□□□□ 0.33
CPSF3-203ENST00000475482 TRIM6Q9C030 488 aaPredicted RBP17.13■□□□□ 0.33
CPSF3-203ENST00000475482 GRPEL1Q9HAV7 217 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 POLD4Q9HCU8 107 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 C11orf16Q9NQ32 467 aa17.13■□□□□ 0.33
CPSF3-203ENST00000475482 N4BP3O15049 544 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 PRKCBP05771 671 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 AKAP5P24588 427 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 SSTR3P32745 418 aaPredicted RBP17.12■□□□□ 0.33
CPSF3-203ENST00000475482 SCNN1GP51170 649 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 DPYDQ12882 1025 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 PRPF4BQ13523 1007 aaKnown RBP17.12■□□□□ 0.33
CPSF3-203ENST00000475482 CBX2Q14781 532 aaPredicted RBP17.12■□□□□ 0.33
CPSF3-203ENST00000475482 PTPN14Q15678 1187 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 DEPTORQ8TB45 409 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 FAM200AQ8TCP9 573 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 ANP32BQ92688 251 aaKnown RBP17.12■□□□□ 0.33
CPSF3-203ENST00000475482 RAD54LQ92698 747 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 CASP10Q92851 521 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 IFT74Q96LB3 600 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 FAM193BQ96PV7 902 aaPredicted RBP17.12■□□□□ 0.33
CPSF3-203ENST00000475482 PLIN2Q99541 437 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 NTPCRQ9BSD7 190 aaKnown RBP17.12■□□□□ 0.33
CPSF3-203ENST00000475482 KIFC3Q9BVG8 833 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 RUSC1Q9BVN2 902 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 C17orf75Q9HAS0 396 aa17.12■□□□□ 0.33
CPSF3-203ENST00000475482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
CPSF3-203ENST00000475482 LOC730098B7Z3J9 87 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 GPR37L1O60883 481 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 SRGAP2BP0DMP2 458 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
CPSF3-203ENST00000475482 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 SYT2Q8N9I0 419 aaPredicted RBP17.11■□□□□ 0.33
CPSF3-203ENST00000475482 SLC22A17Q8WUG5 538 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 AUTS2Q8WXX7 1259 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 C7orf25Q9BPX7 421 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 TIPINQ9BVW5 301 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 APOL6Q9BWW8 343 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 ARHGAP28Q9P2N2 729 aa17.11■□□□□ 0.33
CPSF3-203ENST00000475482 TRIOO75962 3097 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.1■□□□□ 0.33
CPSF3-203ENST00000475482 HIP1RO75146 1068 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 SOD2P04179 222 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 NPTX2P47972 431 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 ZNF165P49910 485 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 SLC12A3P55017 1021 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 GRIK3Q13003 919 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 NAB2Q15742 525 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 GPR65Q8IYL9 337 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 GRAMD1CQ8IYS0 662 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 MLKLQ8NB16 471 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 ERCC4Q92889 916 aaPredicted RBP17.1■□□□□ 0.33
CPSF3-203ENST00000475482 HERC2P3Q9BVR0 1158 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 PHF7Q9BWX1 381 aaPredicted RBP17.1■□□□□ 0.33
CPSF3-203ENST00000475482 TMEM134Q9H6X4 195 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
CPSF3-203ENST00000475482 BIN1O00499 593 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 PTGESO14684 152 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 PRR29P0C7W0 189 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 ALADP13716 330 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 PEX3P56589 373 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 KCNB1Q14721 858 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 KIAA0319Q5VV43 1072 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 LLGL2Q6P1M3 1020 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 CNNM4Q6P4Q7 775 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 KCNN1Q92952 543 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 KLHL5Q96PQ7 755 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 BPIFA3Q9BQP9 254 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 LRFN3Q9BTN0 628 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 PTPRHQ9HD43 1115 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 CHST7Q9NS84 486 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 BLOC1S4Q9NUP1 217 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 KCND2Q9NZV8 630 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 KLK14Q9P0G3 267 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 PARP2Q9UGN5 583 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 MAN1B1Q9UKM7 699 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
CPSF3-203ENST00000475482 MTCL1Q9Y4B5 1905 aaKnown RBP17.09■□□□□ 0.33
CPSF3-203ENST00000475482 TECTAO75443 2155 aa17.09■□□□□ 0.33
CPSF3-203ENST00000475482 MYO10Q9HD67 2058 aa17.08■□□□□ 0.33
CPSF3-203ENST00000475482 PHLPP2Q6ZVD8 1323 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 SMTNL1A8MU46 457 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 BECN2A8MW95 431 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 F8W810 466 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 GOLGA6L19H0YKK7 550 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 K7ERI5 159 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 DCXO43602 365 aa17.08■□□□□ 0.32
CPSF3-203ENST00000475482 RPN1P04843 607 aaKnown RBP17.08■□□□□ 0.32
CPSF3-203ENST00000475482 CNPP09543 421 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms