RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 TMEM169Q96HH4 297 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 CDX2Q99626 313 aaPredicted RBP11.46□□□□□ -0.57
COPS6-208ENST00000474823 CBWD1Q9BRT8 395 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 FAM213AQ9BRX8 229 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 PCIF1Q9H4Z3 704 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 AGPAT3Q9NRZ7 376 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 SPG21Q9NZD8 308 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 CNTN3Q9P232 1028 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 PUF60Q9UHX1 559 aaKnown RBP11.46□□□□□ -0.57
COPS6-208ENST00000474823 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
COPS6-208ENST00000474823 FAN1Q9Y2M0 1017 aa11.46□□□□□ -0.57
COPS6-208ENST00000474823 LAMA2P24043 3122 aaKnown RBP11.46□□□□□ -0.58
COPS6-208ENST00000474823 RALGAPA2Q2PPJ7 1873 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 NLRC5Q86WI3 1866 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 SMIM28A0A1B0GU29 152 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 EPOPA6NHQ4 379 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 NT5C1B-RDH14C9J2C7 533 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 RFXAPO00287 272 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 PTGESO14684 152 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 TGFB1I1O43294 461 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 XPOTO43592 962 aaKnown RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 CALUO43852 315 aaPredicted RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 EXTL3O43909 919 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 FAM189A1O60320 539 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 FGF18O76093 207 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 GALTP07902 379 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 KCNE1P15382 129 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 FOSL2P15408 326 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 HOXD13P35453 343 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 PBX3P40426 434 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 SLC11A1P49279 550 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 POU5F1Q01860 360 aaKnown RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 DSC1Q08554 894 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 STIM1Q13586 685 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 BMS1Q14692 1282 aaKnown RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 SLC10A6Q3KNW5 377 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 XKR4Q5GH76 650 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 ZBTB41Q5SVQ8 909 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 ALKAL1Q6UXT8 129 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 COLGALT2Q8IYK4 626 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 GPD1LQ8N335 351 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 GUF1Q8N442 669 aaKnown RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 SPATA20Q8TB22 786 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 MYLIPQ8WY64 445 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 KIF12Q96FN5 646 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 GUCD1Q96NT3 240 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 TSPAN18Q96SJ8 248 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 COLEC11Q9BWP8 271 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 LMAN2LQ9H0V9 348 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 NUP62CLQ9H1M0 184 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 CLSTN2Q9H4D0 955 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 KIAA1586Q9HCI6 787 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 ALG13Q9NP73 1137 aaKnown RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 HSPBP1Q9NZL4 362 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 PLAGL2Q9UPG8 496 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 MAPK8IP1Q9UQF2 711 aa11.45□□□□□ -0.58
COPS6-208ENST00000474823 PRG3Q9Y2Y8 225 aaPredicted RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.45□□□□□ -0.58
COPS6-208ENST00000474823 TTC26A0AVF1 554 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 GOLGA8IPA6NC78 632 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 CASTOR2A6NHX0 329 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 ZNF233A6NK53 670 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 GOLGA8JA6NMD2 632 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 LACTBL1A8MY62 500 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 PDXKO00764 312 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 NRP1O14786 923 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 CLIC2O15247 247 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 IL18RAPO95256 599 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 MBD3O95983 291 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 ITGB1P05556 798 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 PPP1R2P41236 205 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 CYP2J2P51589 502 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 PLCB3Q01970 1234 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 UBE3AQ05086 875 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 ENOX2Q16206 610 aaKnown RBP11.44□□□□□ -0.58
COPS6-208ENST00000474823 ISM2Q6H9L7 571 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 SMYD4Q8IYR2 804 aaPredicted RBP11.44□□□□□ -0.58
COPS6-208ENST00000474823 SLC39A11Q8N1S5 342 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 XXYLT1Q8NBI6 393 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 POF1BQ8WVV4 589 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
COPS6-208ENST00000474823 IGSF21Q96ID5 467 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 UROC1Q96N76 676 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 PPP1R10Q96QC0 940 aaKnown RBP11.44□□□□□ -0.58
COPS6-208ENST00000474823 ASB7Q9H672 318 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 RBAKQ9NYW8 714 aaPredicted RBP11.44□□□□□ -0.58
COPS6-208ENST00000474823 STK39Q9UEW8 545 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 MAN1B1Q9UKM7 699 aa11.44□□□□□ -0.58
COPS6-208ENST00000474823 TDRD15B5MCY1 1934 aaKnown RBP11.44□□□□□ -0.58
COPS6-208ENST00000474823 CITO14578 2027 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 BIN1O00499 593 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 PSMA7O14818 248 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 GRM6O15303 877 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 B4GALT3O60512 393 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 EXOC3O60645 756 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 LPXNO60711 386 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 TADA2AO75478 443 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 CSPG5O95196 566 aa11.43□□□□□ -0.58
COPS6-208ENST00000474823 MCM4P33991 863 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms