RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 TMEM192Q8IY95 271 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 RPUSD2Q8IZ73 545 aaKnown RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 LINC01599Q8WXQ3 324 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 PGBD4Q96DM1 585 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 MFSD14AQ96MC6 490 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 RPS6KC1Q96S38 1066 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 TUBGCP2Q9BSJ2 902 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 TRIM5Q9C035 493 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 VPS16Q9H269 839 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 TSPYL2Q9H2G4 693 aaPredicted RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 SNTG2Q9NY99 539 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 IFNKQ9P0W0 207 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 LIMA1Q9UHB6 759 aaKnown RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 LRFN2Q9ULH4 789 aa9.05□□□□□ -0.96
CNN3-205ENST00000474409 ZMYND8Q9ULU4 1186 aaPredicted RBP9.05□□□□□ -0.96
CNN3-205ENST00000474409 COL4A4P53420 1690 aaPredicted RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 LRRIQ3A6PVS8 624 aaPredicted RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 STX10O60499 249 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 N4BP1O75113 896 aaKnown RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 AFPP02771 609 aaKnown RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 TMEM191BP0C7N4 346 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 AKAP5P24588 427 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 MLH1P40692 756 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 MXI1P50539 228 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 UBASH3AP57075 661 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 MYL7Q01449 175 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 ENPEPQ07075 957 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 IKBKEQ14164 716 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 GPNMBQ14956 572 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 FKBP15Q5T1M5 1219 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 LMBRD2Q68DH5 695 aaPredicted RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 SARM1Q6SZW1 724 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 FAM43BQ6ZT52 329 aaPredicted RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 SLC24A5Q71RS6 500 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 WDR49Q8IV35 697 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 SMG8Q8ND04 991 aaKnown RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 TMC2Q8TDI7 906 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 ANP32BQ92688 251 aaKnown RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 BADQ92934 168 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 LPPQ93052 612 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 ANKRD36BP1Q96IX9 119 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 SNX27Q96L92 541 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 CGRRF1Q99675 332 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 LBHD1Q9BQE6 289 aaPredicted RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 TRAIPQ9BWF2 469 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 PDE11AQ9HCR9 933 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 IL23AQ9NPF7 189 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 RGS18Q9NS28 235 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 RNF216Q9NWF9 866 aaPredicted RBP9.04□□□□□ -0.96
CNN3-205ENST00000474409 KLK14Q9P0G3 267 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 PCDH10Q9P2E7 1040 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 CEP290O15078 2479 aa9.04□□□□□ -0.96
CNN3-205ENST00000474409 MTCL1Q9Y4B5 1905 aaKnown RBP9.03□□□□□ -0.96
CNN3-205ENST00000474409 PATJQ8NI35 1801 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 A0A0U1RQF3 1178 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 LGALS16A8MUM7 142 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 C9IYK1 514 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 XPOTO43592 962 aaKnown RBP9.03□□□□□ -0.96
CNN3-205ENST00000474409 EFCAB14O75071 495 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 TNNC2P02585 160 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 NFICP08651 508 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 ACRP10323 421 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 KCNJ6P48051 423 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 FMO5P49326 533 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 DLG4P78352 724 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 TFAMQ00059 246 aaKnown RBP9.03□□□□□ -0.96
CNN3-205ENST00000474409 POU5F1Q01860 360 aaKnown RBP9.03□□□□□ -0.96
CNN3-205ENST00000474409 UBXN1Q04323 297 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 CETN1Q12798 172 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 KCNH2Q12809 1159 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 BIRC3Q13489 604 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 TMEM132DQ14C87 1099 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 TCTN1Q2MV58 587 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 VWA3BQ502W6 1294 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 MIIPQ5JXC2 388 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 GLRA4Q5JXX5 417 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 JADE1Q6IE81 842 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 PSRC1Q6PGN9 363 aaPredicted RBP9.03□□□□□ -0.96
CNN3-205ENST00000474409 ECHDC2Q86YB7 292 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 CD302Q8IX05 232 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 ABI1Q8IZP0 508 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 PLEKHO2Q8TD55 490 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 PARD3BQ8TEW8 1205 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 SLC35C1Q96A29 364 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 KIF12Q96FN5 646 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 BORCS6Q96GS4 357 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 XPO4Q9C0E2 1151 aaKnown RBP9.03□□□□□ -0.96
CNN3-205ENST00000474409 MTMR12Q9C0I1 747 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 NDST4Q9H3R1 872 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 ASB7Q9H672 318 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 RSAD1Q9HA92 442 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 PLEKHA5Q9HAU0 1116 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 UBN1Q9NPG3 1134 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 TMEM161AQ9NX61 479 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 CNTN3Q9P232 1028 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 INPP5FQ9Y2H2 1132 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 NR2E3Q9Y5X4 410 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 PTPRJQ12913 1337 aa9.03□□□□□ -0.96
CNN3-205ENST00000474409 ZNF638Q14966 1978 aaKnown RBP9.03□□□□□ -0.96
CNN3-205ENST00000474409 A0A1B0GTH6 734 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms