RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 SYCP3Q8IZU3 236 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 HVCN1Q96D96 273 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 MSTO1Q9BUK6 570 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 EMILIN2Q9BXX0 1053 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 MAGEF1Q9HAY2 307 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 SLC38A7Q9NVC3 462 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 ADAM28Q9UKQ2 775 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 PCDHB13Q9Y5F0 798 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 EYSQ5T1H1 3165 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 PRUNE2Q8WUY3 3088 aa15.53■□□□□ 0.08
VAMP4-203ENST00000474047 SMIM28A0A1B0GU29 152 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 ABLIM1O14639 778 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 SOD2P04179 222 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 CLTAP09496 248 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 ADALQ6DHV7 355 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 KCNN1Q92952 543 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 CHAMP1Q96JM3 812 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 ACCSQ96QU6 501 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 COL25A1Q9BXS0 654 aaPredicted RBP15.52■□□□□ 0.08
VAMP4-203ENST00000474047 CXCL16Q9H2A7 254 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 ST6GALNAC4Q9H4F1 302 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 KBTBD4Q9NVX7 518 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 MARCH5Q9NX47 278 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 CACNG4Q9UBN1 327 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 CD207Q9UJ71 328 aa15.52■□□□□ 0.08
VAMP4-203ENST00000474047 CUL9Q8IWT3 2517 aa15.52■□□□□ 0.07
VAMP4-203ENST00000474047 TCF20Q9UGU0 1960 aaKnown RBP15.52■□□□□ 0.07
VAMP4-203ENST00000474047 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.07
VAMP4-203ENST00000474047 TULP1O00294 542 aaPredicted RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 PIGRP01833 764 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 CMA1P23946 247 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 LTBRP36941 435 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 AFMP43652 599 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 GLUD2P49448 558 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 DLX2Q07687 328 aaPredicted RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 ALCAMQ13740 583 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 FUT10Q6P4F1 479 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 MAP4K3Q8IVH8 894 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 HASPINQ8TF76 798 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 SNX27Q96L92 541 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 UROC1Q96N76 676 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 FIZ1Q96SL8 496 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 HERC2P3Q9BVR0 1158 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 VN1R3Q9BXE9 311 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 BARX2Q9UMQ3 279 aaPredicted RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 A0A1B0GVL5 298 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 SPDYE4A6NLX3 237 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 F8W810 466 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 OGTO15294 1046 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 CLASP2O75122 1294 aaKnown RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 TBX10O75333 385 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 KLRC2P26717 231 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 POSTNQ15063 836 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 USP41Q3LFD5 358 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 CASP10Q92851 521 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 FAM212AQ96EL1 285 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 PPP1R10Q96QC0 940 aaKnown RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 UHRF1Q96T88 793 aaPredicted RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 PAAF1Q9BRP4 392 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 TRIM9Q9C026 710 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 RPF1Q9H9Y2 349 aaKnown RBP15.51■□□□□ 0.07
VAMP4-203ENST00000474047 OLFML3Q9NRN5 406 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 IRAK3Q9Y616 596 aa15.51■□□□□ 0.07
VAMP4-203ENST00000474047 SF3B1O75533 1304 aaKnown RBP eCLIP15.51■□□□□ 0.074e-7■■■■■ 133.7
VAMP4-203ENST00000474047 TRIP11Q15643 1979 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 B3GAT3O94766 335 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 CXCL8P10145 99 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 RBM10P98175 930 aaKnown RBP15.5■□□□□ 0.07
VAMP4-203ENST00000474047 PPP2R3AQ06190 1150 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 ELAVL2Q12926 359 aaKnown RBP15.5■□□□□ 0.07
VAMP4-203ENST00000474047 COASYQ13057 564 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 PTPN14Q15678 1187 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 L1TD1Q5T7N2 865 aaKnown RBP15.5■□□□□ 0.07
VAMP4-203ENST00000474047 DCLRE1AQ6PJP8 1040 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 ALKAL1Q6UXT8 129 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 TAS1R1Q7RTX1 841 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 PPFIBP1Q86W92 1011 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 POMGNT1Q8WZA1 660 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 DDX27Q96GQ7 796 aaKnown RBP15.5■□□□□ 0.07
VAMP4-203ENST00000474047 C7orf25Q9BPX7 421 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 PLEKHA5Q9HAU0 1116 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 SERTAD1Q9UHV2 236 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 CITO14578 2027 aa15.5■□□□□ 0.07
VAMP4-203ENST00000474047 A0A0B4J269 797 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 FRMD3A2A2Y4 597 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 GRXCR2A6NFK2 248 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 ANKRD63C9JTQ0 380 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 KIF4AO95239 1232 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 MYBP10242 640 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 KCNE1P15382 129 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 PFKFB1P16118 471 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 SLC10A6Q3KNW5 377 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 XKR4Q5GH76 650 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 GPR62Q9BZJ7 368 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 HAPLN2Q9GZV7 340 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 BLZF1Q9H2G9 400 aa15.49■□□□□ 0.07
VAMP4-203ENST00000474047 GOLGA2P5Q9HBQ8 144 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms