RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SLC39A2Q9NP94 309 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 AGO2Q9UKV8 859 aaKnown RBP14.99□□□□□ -0.01
USF1-205ENST00000473969 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
USF1-205ENST00000473969 NLRC5Q86WI3 1866 aa14.99□□□□□ -0.01
USF1-205ENST00000473969 UBE4BO95155 1302 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 CUL9Q8IWT3 2517 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 SMIM28A0A1B0GU29 152 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 CASTOR2A6NHX0 329 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 DLL1O00548 723 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 PTGESO14684 152 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 XPOTO43592 962 aaKnown RBP14.98□□□□□ -0.01
USF1-205ENST00000473969 KIF20AO95235 890 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 RPN1P04843 607 aaKnown RBP14.98□□□□□ -0.01
USF1-205ENST00000473969 GARTP22102 1010 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 DNAJB1P25685 340 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 KCNA1Q09470 495 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 HSP90AA2PQ14568 343 aaPredicted RBP14.98□□□□□ -0.01
USF1-205ENST00000473969 SMC1AQ14683 1233 aaKnown RBP14.98□□□□□ -0.01
USF1-205ENST00000473969 KMT5BQ4FZB7 885 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 TCEAL5Q5H9L2 206 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 PLPP4Q5VZY2 271 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 ARMCX5Q6P1M9 558 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 CD302Q8IX05 232 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 FMR1NBQ8N0W7 255 aaPredicted RBP14.98□□□□□ -0.01
USF1-205ENST00000473969 ZNF507Q8TCN5 953 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 NOC3LQ8WTT2 800 aaKnown RBP14.98□□□□□ -0.01
USF1-205ENST00000473969 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 CNTN3Q9P232 1028 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 STYXL1Q9Y6J8 313 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 TCHHQ07283 1943 aa14.98□□□□□ -0.01
USF1-205ENST00000473969 FSD2A1L4K1 749 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 KIAA0391O15091 583 aaKnown RBP14.97□□□□□ -0.01
USF1-205ENST00000473969 KINO60870 393 aaKnown RBP14.97□□□□□ -0.01
USF1-205ENST00000473969 SMC2O95347 1197 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 CXCL14O95715 111 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 CXCL8P10145 99 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 KCNE1P15382 129 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 IRS1P35568 1242 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 ERVFC1P60507 584 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 SLC10A6Q3KNW5 377 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 XKR4Q5GH76 650 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 KIAA1841Q6NSI8 718 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 SLC39A4Q6P5W5 647 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 ALKAL1Q6UXT8 129 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 HS2ST1Q7LGA3 356 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 NELFCDQ8IXH7 590 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 KIF12Q96FN5 646 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 DDX27Q96GQ7 796 aaKnown RBP14.97□□□□□ -0.01
USF1-205ENST00000473969 PPP1R10Q96QC0 940 aaKnown RBP14.97□□□□□ -0.01
USF1-205ENST00000473969 TSPAN18Q96SJ8 248 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 FGFBP2Q9BYJ0 223 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 HAPLN2Q9GZV7 340 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 IGFLR1Q9H665 355 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 TLE6Q9H808 572 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 ADAM28Q9UKQ2 775 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 COG5Q9UP83 839 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 SSX2IPQ9Y2D8 614 aa14.97□□□□□ -0.01
USF1-205ENST00000473969 CHD9Q3L8U1 2897 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 TISP43B9A030 160 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 KLRC4O43908 158 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 B4GALT3O60512 393 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 TNFSF9P41273 254 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 ACOT2P49753 483 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 SNRPFP62306 86 aaKnown RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 POU5F1Q01860 360 aaKnown RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 EHHADHQ08426 723 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 DPYDQ12882 1025 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 ELAVL2Q12926 359 aaKnown RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 CAMK1Q14012 370 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 DCLRE1AQ6PJP8 1040 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 RBM23Q86U06 439 aaKnown RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 TMEM173Q86WV6 379 aaPredicted RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 RABGGTAQ92696 567 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 HLA-CQ95604 372 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 TIGD1Q96MW7 591 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 CDCA3Q99618 268 aaPredicted RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 FAM213AQ9BRX8 229 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 MRPL17Q9NRX2 175 aaKnown RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 RMND1Q9NWS8 449 aa14.96□□□□□ -0.01
USF1-205ENST00000473969 CPSF3Q9UKF6 684 aaKnown RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 COL4A4P53420 1690 aaPredicted RBP14.96□□□□□ -0.01
USF1-205ENST00000473969 SF3B1O75533 1304 aaKnown RBP eCLIP14.95□□□□□ -0.026e-7■■■■■ 71.8
USF1-205ENST00000473969 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 LACTBL1A8MY62 500 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 FSCN2O14926 492 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 TRAPPC3O43617 180 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 B3GAT3O94766 335 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 SOD2P04179 222 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 URODP06132 367 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 PRR29P0C7W0 189 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 SRGAP2BP0DMP2 458 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 CTSAP10619 480 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 RPL9P32969 192 aaKnown RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 NRIP1P48552 1158 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 UBE2HP62256 183 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 ENOX2Q16206 610 aaKnown RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 KNOP1Q1ED39 458 aaKnown RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 AAK1Q2M2I8 961 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 FUT10Q6P4F1 479 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms