RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KIAA0391O15091 583 aaKnown RBP13.52□□□□□ -0.25
DDX56-209ENST00000473924 FGF18O76093 207 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 GALTP07902 379 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 CXCL8P10145 99 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 FOSL2P15408 326 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 HOXD13P35453 343 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 KRT17Q04695 432 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 CAMK4Q16566 473 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 BMT2Q1RMZ1 405 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 SLC10A6Q3KNW5 377 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 ZBTB41Q5SVQ8 909 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 COLGALT2Q8IYK4 626 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 SAAL1Q96ER3 474 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 TMEM169Q96HH4 297 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 CBWD1Q9BRT8 395 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 FAM213AQ9BRX8 229 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 CXCL16Q9H2A7 254 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 AGPAT3Q9NRZ7 376 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 CPSF3Q9UKF6 684 aaKnown RBP13.52□□□□□ -0.25
DDX56-209ENST00000473924 PLAGL2Q9UPG8 496 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 MAPK8IP1Q9UQF2 711 aa13.52□□□□□ -0.25
DDX56-209ENST00000473924 SMIM28A0A1B0GU29 152 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 GOLGA8IPA6NC78 632 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 GOLGA8JA6NMD2 632 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 NRP1O14786 923 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 CLIC2O15247 247 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 TGFB1I1O43294 461 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 FAM189A1O60320 539 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 B4GALT3O60512 393 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 CSPG5O95196 566 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 ITGB1P05556 798 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 SLC11A1P49279 550 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 SNRPFP62306 86 aaKnown RBP13.51□□□□□ -0.25
DDX56-209ENST00000473924 DSC1Q08554 894 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 TUSC3Q13454 348 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
DDX56-209ENST00000473924 PTPROQ16827 1216 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 ALKAL1Q6UXT8 129 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 SLC39A11Q8N1S5 342 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 GPD1LQ8N335 351 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 GOLGA5Q8TBA6 731 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 GTPBP4Q9BZE4 634 aaKnown RBP13.51□□□□□ -0.25
DDX56-209ENST00000473924 SLC38A7Q9NVC3 462 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 CNTN3Q9P232 1028 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 CGNQ9P2M7 1197 aaKnown RBP13.51□□□□□ -0.25
DDX56-209ENST00000473924 PUF60Q9UHX1 559 aaKnown RBP13.51□□□□□ -0.25
DDX56-209ENST00000473924 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
DDX56-209ENST00000473924 CHD9Q3L8U1 2897 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 CITO14578 2027 aa13.51□□□□□ -0.25
DDX56-209ENST00000473924 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 TTC26A0AVF1 554 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 LACTBL1A8MY62 500 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 GRM6O15303 877 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 EXTL3O43909 919 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 KCNE1P15382 129 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 CYP2J2P51589 502 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 PLCB3Q01970 1234 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 ADGRE1Q14246 886 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 XKR4Q5GH76 650 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 CD302Q8IX05 232 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 SMYD4Q8IYR2 804 aaPredicted RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 MICALL1Q8N3F8 863 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 GUF1Q8N442 669 aaKnown RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 SPATA20Q8TB22 786 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 POF1BQ8WVV4 589 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 ZMAT2Q96NC0 199 aaKnown RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 PPP1R10Q96QC0 940 aaKnown RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 COLEC11Q9BWP8 271 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 LMAN2LQ9H0V9 348 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 RBAKQ9NYW8 714 aaPredicted RBP13.5□□□□□ -0.25
DDX56-209ENST00000473924 HSPBP1Q9NZL4 362 aa13.5□□□□□ -0.25
DDX56-209ENST00000473924 BIN1O00499 593 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 PDXKO00764 312 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 XPOTO43592 962 aaKnown RBP13.49□□□□□ -0.25
DDX56-209ENST00000473924 CALUO43852 315 aaPredicted RBP13.49□□□□□ -0.25
DDX56-209ENST00000473924 LPXNO60711 386 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 IL18RAPO95256 599 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 POU5F1Q01860 360 aaKnown RBP13.49□□□□□ -0.25
DDX56-209ENST00000473924 UBE3AQ05086 875 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 SPAG1Q07617 926 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 STIM1Q13586 685 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 CRELD2Q6UXH1 353 aaPredicted RBP13.49□□□□□ -0.25
DDX56-209ENST00000473924 XXYLT1Q8NBI6 393 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 SPPL3Q8TCT6 385 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 MICAL1Q8TDZ2 1067 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 RABGGTAQ92696 567 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 MRPL38Q96DV4 380 aaKnown RBP13.49□□□□□ -0.25
DDX56-209ENST00000473924 IGSF21Q96ID5 467 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 UROC1Q96N76 676 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 NUP62CLQ9H1M0 184 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 KCTD10Q9H3F6 313 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 ASB7Q9H672 318 aa13.49□□□□□ -0.25
DDX56-209ENST00000473924 GOLGA2P5Q9HBQ8 144 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms