RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 NGRNQ9NPE2 291 aaKnown RBP15.49■□□□□ 0.07
BRCA1-211ENST00000472490 CNTN3Q9P232 1028 aa15.49■□□□□ 0.07
BRCA1-211ENST00000472490 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
BRCA1-211ENST00000472490 SMIM28A0A1B0GU29 152 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 ANKRD63C9JTQ0 380 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 PTGESO14684 152 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 XPOTO43592 962 aaKnown RBP15.48■□□□□ 0.07
BRCA1-211ENST00000472490 NCK2O43639 380 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 KINO60870 393 aaKnown RBP15.48■□□□□ 0.07
BRCA1-211ENST00000472490 PRPF6O94906 941 aaKnown RBP15.48■□□□□ 0.07
BRCA1-211ENST00000472490 RPN1P04843 607 aaKnown RBP15.48■□□□□ 0.07
BRCA1-211ENST00000472490 KCNE1P15382 129 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 GARTP22102 1010 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 CASP1P29466 404 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 UBE2HP62256 183 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 PPP2R3AQ06190 1150 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 KCNA1Q09470 495 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 SKIV2LQ15477 1246 aaKnown RBP15.48■□□□□ 0.07
BRCA1-211ENST00000472490 CCDC85BQ15834 202 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-211ENST00000472490 KMT5BQ4FZB7 885 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 SLC39A4Q6P5W5 647 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 PPM1EQ8WY54 764 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 HPS3Q969F9 1004 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 TCF25Q9BQ70 676 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 SLC39A2Q9NP94 309 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 ENTPD7Q9NQZ7 604 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 RMND1Q9NWS8 449 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 CGNQ9P2M7 1197 aaKnown RBP15.48■□□□□ 0.07
BRCA1-211ENST00000472490 CDH23Q9H251 3354 aa15.48■□□□□ 0.07
BRCA1-211ENST00000472490 TADA2AO75478 443 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 DPYDQ12882 1025 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 SNW1Q13573 536 aaKnown RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 RALGAPA2Q2PPJ7 1873 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 SLC10A6Q3KNW5 377 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 SEZ6Q53EL9 994 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 ARMCX5Q6P1M9 558 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 EPM2AIP1Q7L775 607 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 TMC7Q7Z402 723 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 ELOA2Q8IYF1 753 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 ENGASEQ8NFI3 743 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 GOLGA5Q8TBA6 731 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 DDX27Q96GQ7 796 aaKnown RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 GBP4Q96PP9 640 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 PPP1R10Q96QC0 940 aaKnown RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 GTPBP4Q9BZE4 634 aaKnown RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 HAPLN2Q9GZV7 340 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 KIAA1586Q9HCI6 787 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 CPSF3Q9UKF6 684 aaKnown RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 SSX2IPQ9Y2D8 614 aa15.47■□□□□ 0.07
BRCA1-211ENST00000472490 PRG3Q9Y2Y8 225 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-211ENST00000472490 KLRC4O43908 158 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 FAM189A1O60320 539 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 RHOBTB3O94955 611 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 SMC2O95347 1197 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 CXCL8P10145 99 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 DNAJB1P25685 340 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 SMC1AQ14683 1233 aaKnown RBP15.46■□□□□ 0.07
BRCA1-211ENST00000472490 KCNB1Q14721 858 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 KNOP1Q1ED39 458 aaKnown RBP15.46■□□□□ 0.07
BRCA1-211ENST00000472490 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 GLRA4Q5JXX5 417 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 CLEC17AQ6ZS10 378 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 VPS52Q8N1B4 723 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 SCFD1Q8WVM8 642 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 FGFBP2Q9BYJ0 223 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 ASB7Q9H672 318 aa15.46■□□□□ 0.07
BRCA1-211ENST00000472490 FNDC1Q4ZHG4 1894 aaPredicted RBP15.46■□□□□ 0.06
BRCA1-211ENST00000472490 SF3B1O75533 1304 aaKnown RBP eCLIP15.45■□□□□ 0.06
BRCA1-211ENST00000472490 TTC26A0AVF1 554 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 CASTOR2A6NHX0 329 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 TRAPPC3O43617 180 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 B4GALT3O60512 393 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 ADSSP30520 456 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 RPL9P32969 192 aaKnown RBP15.45■□□□□ 0.06
BRCA1-211ENST00000472490 ACOT2P49753 483 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 ELAVL2Q12926 359 aaKnown RBP15.45■□□□□ 0.06
BRCA1-211ENST00000472490 CAMK1Q14012 370 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 NAB2Q15742 525 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 ENOX2Q16206 610 aaKnown RBP15.45■□□□□ 0.06
BRCA1-211ENST00000472490 TCEAL5Q5H9L2 206 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 DCLRE1AQ6PJP8 1040 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 TMEM173Q86WV6 379 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-211ENST00000472490 FAM212AQ96EL1 285 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 CDCA3Q99618 268 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-211ENST00000472490 ADAM28Q9UKQ2 775 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 COG5Q9UP83 839 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 DERAQ9Y315 318 aa15.45■□□□□ 0.06
BRCA1-211ENST00000472490 TISP43B9A030 160 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 GOLGA6L22H0YM25 854 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 TMEM189-UBE2V1I3L0A0 370 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 FSCN2O14926 492 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 EXTL3O43909 919 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 PRPF40AO75400 957 aaKnown RBP15.44■□□□□ 0.06
BRCA1-211ENST00000472490 B3GAT3O94766 335 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 CSPG5O95196 566 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 IL18RAPO95256 599 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 SOD2P04179 222 aa15.44■□□□□ 0.06
BRCA1-211ENST00000472490 ADRB2P07550 413 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms