RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 GLRA4Q5JXX5 417 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 RESP18Q5W5W9 173 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 LLGL2Q6P1M3 1020 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 RNF168Q8IYW5 571 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 TMEM87AQ8NBN3 555 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 MSLNLQ96KJ4 702 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 NECAB3Q96P71 396 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 PPP1R10Q96QC0 940 aaKnown RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 UHRF1Q96T88 793 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 HERC2P3Q9BVR0 1158 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 STRA6Q9BX79 667 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 GPR62Q9BZJ7 368 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 LRRC27Q9C0I9 530 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 TNMDQ9H2S6 317 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 MRPL44Q9H9J2 332 aaKnown RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 MRPL17Q9NRX2 175 aaKnown RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 TOPORSQ9NS56 1045 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 PANK4Q9NVE7 773 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 TBC1D7Q9P0N9 293 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 CD207Q9UJ71 328 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 ADAM28Q9UKQ2 775 aa10.01□□□□□ -0.81
SYN3-211ENST00000472027 BARX2Q9UMQ3 279 aaPredicted RBP10.01□□□□□ -0.81
SYN3-211ENST00000472027 ATG2AQ2TAZ0 1938 aa10□□□□□ -0.81
SYN3-211ENST00000472027 PRUNE2Q8WUY3 3088 aa10□□□□□ -0.81
SYN3-211ENST00000472027 FRMD3A2A2Y4 597 aa10□□□□□ -0.81
SYN3-211ENST00000472027 ANKRD63C9JTQ0 380 aa10□□□□□ -0.81
SYN3-211ENST00000472027 C2CD2LO14523 706 aa10□□□□□ -0.81
SYN3-211ENST00000472027 HNRNPDLO14979 420 aaKnown RBP10□□□□□ -0.81
SYN3-211ENST00000472027 MEFVO15553 781 aaPredicted RBP10□□□□□ -0.81
SYN3-211ENST00000472027 MBTPS2O43462 519 aa10□□□□□ -0.81
SYN3-211ENST00000472027 CLCNKBP51801 687 aa10□□□□□ -0.81
SYN3-211ENST00000472027 AMPD3Q01432 767 aa10□□□□□ -0.81
SYN3-211ENST00000472027 COASYQ13057 564 aa10□□□□□ -0.81
SYN3-211ENST00000472027 SLC10A6Q3KNW5 377 aa10□□□□□ -0.81
SYN3-211ENST00000472027 KIAA0319Q5VV43 1072 aa10□□□□□ -0.81
SYN3-211ENST00000472027 ADALQ6DHV7 355 aa10□□□□□ -0.81
SYN3-211ENST00000472027 KIAA1841Q6NSI8 718 aa10□□□□□ -0.81
SYN3-211ENST00000472027 FUT10Q6P4F1 479 aa10□□□□□ -0.81
SYN3-211ENST00000472027 SLC39A4Q6P5W5 647 aa10□□□□□ -0.81
SYN3-211ENST00000472027 MAP4K3Q8IVH8 894 aa10□□□□□ -0.81
SYN3-211ENST00000472027 CCDC65Q8IXS2 484 aa10□□□□□ -0.81
SYN3-211ENST00000472027 HASPINQ8TF76 798 aa10□□□□□ -0.81
SYN3-211ENST00000472027 LEO1Q8WVC0 666 aaPredicted RBP10□□□□□ -0.81
SYN3-211ENST00000472027 SNX27Q96L92 541 aa10□□□□□ -0.81
SYN3-211ENST00000472027 SPATA32Q96LK8 384 aa10□□□□□ -0.81
SYN3-211ENST00000472027 ZMAT2Q96NC0 199 aaKnown RBP10□□□□□ -0.81
SYN3-211ENST00000472027 KLHL5Q96PQ7 755 aa10□□□□□ -0.81
SYN3-211ENST00000472027 EMILIN2Q9BXX0 1053 aa10□□□□□ -0.81
SYN3-211ENST00000472027 CHST7Q9NS84 486 aa10□□□□□ -0.81
SYN3-211ENST00000472027 CNTN3Q9P232 1028 aa10□□□□□ -0.81
SYN3-211ENST00000472027 SSX2IPQ9Y2D8 614 aa10□□□□□ -0.81
SYN3-211ENST00000472027 ATP6V1DQ9Y5K8 247 aa10□□□□□ -0.81
SYN3-211ENST00000472027 HCFC2Q9Y5Z7 792 aa10□□□□□ -0.81
SYN3-211ENST00000472027 A0A0B4J269 797 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 OGTO15294 1046 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 PPP1R37O75864 691 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 B3GAT3O94766 335 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 KIF4AO95239 1232 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 GCNT3O95395 438 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 URODP06132 367 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 CLTAP09496 248 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 CNPP09543 421 aaKnown RBP9.99□□□□□ -0.81
SYN3-211ENST00000472027 SRGAP2BP0DMP2 458 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 MYBP10242 640 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 KCNE1P15382 129 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 CMA1P23946 247 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 IGFBP6P24592 240 aaPredicted RBP9.99□□□□□ -0.81
SYN3-211ENST00000472027 KLRC2P26717 231 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 TNFSF9P41273 254 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 GLUD2P49448 558 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 DSG1Q02413 1049 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 SOX4Q06945 474 aaPredicted RBP9.99□□□□□ -0.81
SYN3-211ENST00000472027 KCNA1Q09470 495 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 SMAD4Q13485 552 aaKnown RBP9.99□□□□□ -0.81
SYN3-211ENST00000472027 SMAD2Q15796 467 aaKnown RBP9.99□□□□□ -0.81
SYN3-211ENST00000472027 KYAT1Q16773 422 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 UPP1Q16831 310 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 USP41Q3LFD5 358 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 L1TD1Q5T7N2 865 aaKnown RBP9.99□□□□□ -0.81
SYN3-211ENST00000472027 SLFN12LQ6IEE8 588 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 ANKRD54Q6NXT1 300 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 DCLRE1AQ6PJP8 1040 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 SMRP1Q8NCR6 262 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 SLC22A17Q8WUG5 538 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 CASP10Q92851 521 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 HVCN1Q96D96 273 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 B3GALT6Q96L58 329 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 UROC1Q96N76 676 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 C7orf25Q9BPX7 421 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 PYM1Q9BRP8 204 aaKnown RBP9.99□□□□□ -0.81
SYN3-211ENST00000472027 TRIM9Q9C026 710 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 IKZF4Q9H2S9 585 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 PLEKHA5Q9HAU0 1116 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 GOLGA2P5Q9HBQ8 144 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 OLFML3Q9NRN5 406 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 KCNH3Q9ULD8 1083 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 FAM50BQ9Y247 325 aa9.99□□□□□ -0.81
SYN3-211ENST00000472027 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms