RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CSRP2Q16527 193 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 TANGO2Q6ICL3 276 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 PDXDC1Q6P996 788 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 PRR23CQ6ZRP0 262 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 PRR23BQ6ZRT6 265 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 Q6ZUG5 572 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 RTL10Q7L3V2 364 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 BRF1Q92994 677 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 ELSPBP1Q96BH3 223 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 MTRQ99707 1265 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 SLKQ9H2G2 1235 aaPredicted RBP21.12■□□□□ 0.97
SORT1-203ENST00000471996 ANGPTL2Q9UKU9 493 aa21.12■□□□□ 0.97
SORT1-203ENST00000471996 CASTOR2A6NHX0 329 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 SLC37A4O43826 429 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 KIF4AO95239 1232 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 NPTXRO95502 500 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 CCR3P51677 355 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 XKR9Q5GH70 373 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 SLC27A1Q6PCB7 646 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 POTEHQ6S545 545 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 CDR2LQ86X02 465 aaPredicted RBP21.11■□□□□ 0.97
SORT1-203ENST00000471996 DDX1Q92499 740 aaKnown RBP21.11■□□□□ 0.97
SORT1-203ENST00000471996 FAM20AQ96MK3 541 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 LXNQ9BS40 222 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 XPNPEP1Q9NQW7 623 aa21.11■□□□□ 0.97
SORT1-203ENST00000471996 RALYQ9UKM9 306 aaKnown RBP21.11■□□□□ 0.97
SORT1-203ENST00000471996 TDRD15B5MCY1 1934 aaKnown RBP21.1■□□□□ 0.97
SORT1-203ENST00000471996 A0A1B0GUA9 196 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 M0R2N6 131 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 B4GALT5O43286 388 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 GDF9O60383 454 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 RHOP08100 348 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 CPA1P15085 419 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 OR1D2P34982 312 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 ELAVL2Q12926 359 aaKnown RBP21.1■□□□□ 0.97
SORT1-203ENST00000471996 SIM2Q14190 667 aaPredicted RBP21.1■□□□□ 0.97
SORT1-203ENST00000471996 SLC5A9Q2M3M2 681 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 KCNMB3Q9NPA1 279 aa21.1■□□□□ 0.97
SORT1-203ENST00000471996 AVENQ9NQS1 362 aaPredicted RBP21.1■□□□□ 0.97
SORT1-203ENST00000471996 ZBTB39O15060 712 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 DMWDQ09019 674 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 CAPSQ13938 189 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 EPHA7Q15375 998 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 BLIDQ8IZY5 108 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 NFKBIZQ9BYH8 718 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 LMAN1LQ9HAT1 526 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 RGL1Q9NZL6 768 aa21.09■□□□□ 0.97
SORT1-203ENST00000471996 FOXD2O60548 495 aaPredicted RBP21.08■□□□□ 0.97
SORT1-203ENST00000471996 PMLP29590 882 aa21.08■□□□□ 0.97
SORT1-203ENST00000471996 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.08■□□□□ 0.97
SORT1-203ENST00000471996 ASAP3Q8TDY4 903 aa21.08■□□□□ 0.97
SORT1-203ENST00000471996 ZSWIM4Q9H7M6 989 aa21.08■□□□□ 0.97
SORT1-203ENST00000471996 BRD9Q9H8M2 597 aa21.08■□□□□ 0.97
SORT1-203ENST00000471996 MTRRQ9UBK8 725 aa21.08■□□□□ 0.97
SORT1-203ENST00000471996 HRO43593 1189 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 CEBPBP17676 345 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 KCNA4P22459 653 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 FCARP24071 287 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 ARL2P36404 184 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 CXCL12P48061 93 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 GRM2Q14416 872 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 INF2Q27J81 1249 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 FBXL16Q8N461 479 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 DAGLBQ8NCG7 672 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 FAM3CQ92520 227 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 IRF7Q92985 503 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 DYDC2Q96IM9 177 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 TRMT61BQ9BVS5 477 aaKnown RBP21.07■□□□□ 0.96
SORT1-203ENST00000471996 TRPV5Q9NQA5 729 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 NOTCH4Q99466 2003 aa21.07■□□□□ 0.96
SORT1-203ENST00000471996 PTGESO14684 152 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 THP07101 528 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 FGFR3P22607 806 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 CNR2P34972 360 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 SHC2P98077 582 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 SATB1Q01826 763 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 CTTNQ14247 550 aaKnown RBP21.06■□□□□ 0.96
SORT1-203ENST00000471996 NAB2Q15742 525 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 NPY5RQ15761 445 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.06■□□□□ 0.96
SORT1-203ENST00000471996 ZFP14Q9HCL3 533 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 CDY1Q9Y6F8 540 aa21.06■□□□□ 0.96
SORT1-203ENST00000471996 PTPN2P17706 415 aa21.05■□□□□ 0.96
SORT1-203ENST00000471996 GLRA2P23416 452 aa21.05■□□□□ 0.96
SORT1-203ENST00000471996 N4BP2L1Q5TBK1 243 aaPredicted RBP21.05■□□□□ 0.96
SORT1-203ENST00000471996 IL31Q6EBC2 164 aa21.05■□□□□ 0.96
SORT1-203ENST00000471996 MAP4K3Q8IVH8 894 aa21.05■□□□□ 0.96
SORT1-203ENST00000471996 HAS1Q92839 578 aa21.05■□□□□ 0.96
SORT1-203ENST00000471996 AGXT2Q9BYV1 514 aa21.05■□□□□ 0.96
SORT1-203ENST00000471996 NCOA5Q9HCD5 579 aaKnown RBP21.05■□□□□ 0.96
SORT1-203ENST00000471996 ZNF334Q9HCZ1 680 aaPredicted RBP21.05■□□□□ 0.96
SORT1-203ENST00000471996 CHURC1-FNTBB4DL54 471 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 CHRNB1P11230 501 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 FNTBP49356 437 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 CCT2P78371 535 aaKnown RBP21.04■□□□□ 0.96
SORT1-203ENST00000471996 CYP4A11Q02928 519 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 SPIRE1Q08AE8 756 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 SRSF5Q13243 272 aaKnown RBP21.04■□□□□ 0.96
SORT1-203ENST00000471996 GAS6Q14393 721 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 FAM78AQ5JUQ0 283 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms