RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 MICALL1Q8N3F8 863 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 POF1BQ8WVV4 589 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 TMEM206Q9H813 350 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 SLC39A2Q9NP94 309 aa21.56■■□□□ 1.04
HDAC7-220ENST00000471235 CARNS1A5YM72 827 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 CLTAP09496 248 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 ADSSP30520 456 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 UBE3AQ05086 875 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 TUSC3Q13454 348 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 SLC10A6Q3KNW5 377 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 SLFN12LQ6IEE8 588 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 ALKAL1Q6UXT8 129 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 CLEC17AQ6ZS10 378 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 KIAA0895Q8NCT3 520 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 ZNF507Q8TCN5 953 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 SCFD1Q8WVM8 642 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 POMGNT1Q8WZA1 660 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 CCDC34Q96HJ3 373 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 TIGD1Q96MW7 591 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 PPP1R10Q96QC0 940 aaKnown RBP21.55■■□□□ 1.04
HDAC7-220ENST00000471235 MARCH5Q9NX47 278 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 CNTN3Q9P232 1028 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 CACNG4Q9UBN1 327 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 EYSQ5T1H1 3165 aa21.55■■□□□ 1.04
HDAC7-220ENST00000471235 NRP1O14786 923 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 THP07101 528 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 OR1G1P47890 313 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 UBE2HP62256 183 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 PNOCQ13519 176 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 KYAT1Q16773 422 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 BMT2Q1RMZ1 405 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 TIGD5Q53EQ6 642 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 TMEM169Q96HH4 297 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 IGSF21Q96ID5 467 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 AGO2Q9UKV8 859 aaKnown RBP21.54■■□□□ 1.04
HDAC7-220ENST00000471235 LZTS1Q9Y250 596 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 FAN1Q9Y2M0 1017 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 PRG3Q9Y2Y8 225 aaPredicted RBP21.54■■□□□ 1.04
HDAC7-220ENST00000471235 PLXNA3P51805 1871 aa21.54■■□□□ 1.04
HDAC7-220ENST00000471235 SMIM28A0A1B0GU29 152 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 CASTOR2A6NHX0 329 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 RHOBTB3O94955 611 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 KCNE1P15382 129 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 IRS1P35568 1242 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 STK4Q13043 487 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 PSMD2Q13200 908 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 ENOX2Q16206 610 aaKnown RBP21.53■■□□□ 1.04
HDAC7-220ENST00000471235 NELFCDQ8IXH7 590 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 CCDC47Q96A33 483 aaKnown RBP21.53■■□□□ 1.04
HDAC7-220ENST00000471235 ZMAT2Q96NC0 199 aaKnown RBP21.53■■□□□ 1.04
HDAC7-220ENST00000471235 CBWD1Q9BRT8 395 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 TLR9Q9NR96 1032 aa21.53■■□□□ 1.04
HDAC7-220ENST00000471235 CPSF3Q9UKF6 684 aaKnown RBP21.53■■□□□ 1.04
HDAC7-220ENST00000471235 TSC2P49815 1807 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 COL6A3P12111 3177 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 SCN1AP35498 2009 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 TTC26A0AVF1 554 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 F8W810 466 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 KINO60870 393 aaKnown RBP21.52■■□□□ 1.04
HDAC7-220ENST00000471235 PRPF40AO75400 957 aaKnown RBP21.52■■□□□ 1.04
HDAC7-220ENST00000471235 ALDH2P05091 517 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 GARTP22102 1010 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 ACOT2P49753 483 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 KRT17Q04695 432 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 CCDC85BQ15834 202 aaPredicted RBP21.52■■□□□ 1.04
HDAC7-220ENST00000471235 ARMCX5Q6P1M9 558 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 ZSWIM2Q8NEG5 633 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 PAAF1Q9BRP4 392 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 VN1R3Q9BXE9 311 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 RPF1Q9H9Y2 349 aaKnown RBP21.52■■□□□ 1.04
HDAC7-220ENST00000471235 PCDHGC5Q9Y5F6 944 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 BRWD1Q9NSI6 2320 aa21.52■■□□□ 1.04
HDAC7-220ENST00000471235 FSCN2O14926 492 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 TGFB1I1O43294 461 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 PPP2R3AQ06190 1150 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 SOX4Q06945 474 aaPredicted RBP21.51■■□□□ 1.03
HDAC7-220ENST00000471235 KCNB1Q14721 858 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 CRELD2Q6UXH1 353 aaPredicted RBP21.51■■□□□ 1.03
HDAC7-220ENST00000471235 PPM1EQ8WY54 764 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 RABGGTAQ92696 567 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 SAAL1Q96ER3 474 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 NSUN3Q9H649 340 aaKnown RBP21.51■■□□□ 1.03
HDAC7-220ENST00000471235 PLEKHA5Q9HAU0 1116 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 GOLGA2P5Q9HBQ8 144 aa21.51■■□□□ 1.03
HDAC7-220ENST00000471235 ADRB2P07550 413 aa21.5■■□□□ 1.03
HDAC7-220ENST00000471235 ERVFC1P60507 584 aa21.5■■□□□ 1.03
HDAC7-220ENST00000471235 HSP90AA2PQ14568 343 aaPredicted RBP21.5■■□□□ 1.03
HDAC7-220ENST00000471235 TCEAL5Q5H9L2 206 aa21.5■■□□□ 1.03
HDAC7-220ENST00000471235 DDX53Q86TM3 631 aaKnown RBP21.5■■□□□ 1.03
HDAC7-220ENST00000471235 ERCC4Q92889 916 aaPredicted RBP21.5■■□□□ 1.03
HDAC7-220ENST00000471235 PCIF1Q9H4Z3 704 aa21.5■■□□□ 1.03
HDAC7-220ENST00000471235 AGPAT3Q9NRZ7 376 aa21.5■■□□□ 1.03
HDAC7-220ENST00000471235 PUF60Q9UHX1 559 aaKnown RBP21.5■■□□□ 1.03
HDAC7-220ENST00000471235 LACTBL1A8MY62 500 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 KIF4AO95239 1232 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 SPAG1Q07617 926 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 PLPP4Q5VZY2 271 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 ADGRD2Q7Z7M1 963 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 C18orf25Q96B23 403 aaPredicted RBP21.49■■□□□ 1.03
HDAC7-220ENST00000471235 TCF25Q9BQ70 676 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms