RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 IRAK3Q9Y616 596 aa7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 BAZ2AQ9UIF9 1905 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-202ENST00000470661 RNF113AO15541 343 aaKnown RBP7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 PRDM1O75626 825 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 BACE1P56817 501 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 GABPAQ06546 454 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 PKN2Q16513 984 aaKnown RBP7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 FAM209AQ5JX71 171 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 TATDN1Q6P1N9 297 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 CTR9Q6PD62 1173 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 SKAP1Q86WV1 359 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 SMCR8Q8TEV9 937 aaPredicted RBP7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 ALG3Q92685 438 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 SIGLEC10Q96LC7 697 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 DRC1Q96MC2 740 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 PARK7Q99497 189 aaKnown RBP7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 CDC6Q99741 560 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 PAGR1Q9BTK6 254 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 OSBPL2Q9H1P3 480 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 CLDND1Q9NY35 253 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 AGTPBP1Q9UPW5 1226 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 PDE4DIPQ5VU43 2346 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 DOCK1Q14185 1865 aa7.98□□□□□ -1.13
PTP4A1-202ENST00000470661 ATAD5Q96QE3 1844 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 GSG1L2A8MUP6 293 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 NUAK1O60285 661 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 BUB1BO60566 1050 aaPredicted RBP7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 APPP05067 770 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 ASNSP08243 561 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 MX1P20591 662 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 PMLP29590 882 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 FLT3LGP49771 235 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 RGS19P49795 217 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 LSAMPQ13449 338 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 BMS1Q14692 1282 aaKnown RBP7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 KIF22Q14807 665 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 UBE3CQ15386 1083 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 SLC9C1Q4G0N8 1177 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 C12orf60Q5U649 245 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 C1QL4Q86Z23 238 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 SPICE1Q8N0Z3 855 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 Q8N1Y9 231 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 KBTBD3Q8NAB2 608 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 TSPAN17Q96FV3 270 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 TOX2Q96NM4 488 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 IRF2BPLQ9H1B7 796 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 EPB41L4AQ9HCS5 686 aaPredicted RBP7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 TMOD4Q9NZQ9 345 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 RBPJLQ9UBG7 517 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 PPARGC1AQ9UBK2 798 aaKnown RBP7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 SRRDQ9UH36 339 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 X6R8D5 127 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 PTPRFP10586 1907 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 MAST2Q6P0Q8 1798 aa7.97□□□□□ -1.13
PTP4A1-202ENST00000470661 COL2A1P02458 1487 aaPredicted RBP7.96□□□□□ -1.13
PTP4A1-202ENST00000470661 GPAA1O43292 621 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 CNMDO75829 334 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 ASGR2P07307 311 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 MC3RP41968 323 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 VPS53Q5VIR6 699 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 DCP2Q8IU60 420 aaKnown RBP7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 RAET1EQ8TD07 263 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 ZNF333Q96JL9 665 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 EXOC2Q96KP1 924 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 FAM227BQ96M60 508 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 FEZ1Q99689 392 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 FSD1Q9BTV5 496 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 PORCNQ9H237 461 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 AS3MTQ9HBK9 375 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 GPR27Q9NS67 375 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 COA3Q9Y2R0 106 aaPredicted RBP7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 MYPNQ86TC9 1320 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 SALL3Q9BXA9 1300 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 FOCADQ5VW36 1801 aa7.96□□□□□ -1.14
PTP4A1-202ENST00000470661 TRBV23-1A0A0A0MS06 115 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 TNPO2O14787 897 aaKnown RBP7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 FOXP2O15409 715 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 SGSM2O43147 1006 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 CYP2B6P20813 491 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 LIMS1P48059 325 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 PDE1AP54750 535 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 HERVK_113P62684 666 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 IRX3P78415 501 aaPredicted RBP7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 HDAC1Q13547 482 aaPredicted RBP7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 FAM47AQ5JRC9 791 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 MROH9Q5TGP6 573 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 RIOX2Q8IUF8 465 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 TMEFF1Q8IYR6 380 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 DCAF4Q8WV16 495 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 MKL1Q969V6 931 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 GPATCH3Q96I76 525 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 NUP88Q99567 741 aaPredicted RBP7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 AP5M1Q9H0R1 490 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 CDIP1Q9H305 208 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 RPAP3Q9H6T3 665 aaPredicted RBP7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 ZCCHC17Q9NP64 241 aaKnown RBP7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 CABP5Q9NP86 173 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 FBXO28Q9NVF7 368 aa7.95□□□□□ -1.14
PTP4A1-202ENST00000470661 BTBD7Q9P203 1132 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms