RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 STRA6Q9BX79 667 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 CAPS2Q9BXY5 557 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 RPAP3Q9H6T3 665 aaPredicted RBP8.61□□□□□ -1.03
SMC4-212ENST00000470240 UBE2TQ9NPD8 197 aaPredicted RBP8.61□□□□□ -1.03
SMC4-212ENST00000470240 CYLDQ9NQC7 956 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 KMT5AQ9NQR1 393 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 PXMP2Q9NR77 195 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 RNF146Q9NTX7 359 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMC4-212ENST00000470240 SMARCAL1Q9NZC9 954 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 TMOD4Q9NZQ9 345 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 CTTNBP2NLQ9P2B4 639 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 NXF1Q9UBU9 619 aaKnown RBP8.61□□□□□ -1.03
SMC4-212ENST00000470240 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 PCDHA10Q9Y5I2 948 aa8.61□□□□□ -1.03
SMC4-212ENST00000470240 ZNF536O15090 1300 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 C19orf81C9J6K1 198 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 ZC3H11AO75152 810 aaKnown RBP eCLIP8.6□□□□□ -1.034e-12■■■■■ 110
SMC4-212ENST00000470240 RTN2O75298 545 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 LRRN2O75325 713 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 GLI1P08151 1106 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 MYZAPP0CAP1 466 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 VCAM1P19320 739 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 INPP5BP32019 993 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 GUCY2FP51841 1108 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 NCKAP1LP55160 1127 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 PEX3P56589 373 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 RTP1P59025 263 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 ZNF280AP59817 542 aaPredicted RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 RPS6P62753 249 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 GNGT1P63211 74 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 BIRC3Q13489 604 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 DHX34Q14147 1143 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 TCEAL1Q15170 157 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 EPC2Q52LR7 807 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 DALRD3Q5D0E6 543 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 DNAJC21Q5F1R6 531 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 SPDYCQ5MJ68 293 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 MICALCLQ6ZW33 695 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 HOOK3Q86VS8 718 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 SPATS2Q86XZ4 545 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 CCDC125Q86Z20 511 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 APOBEC3FQ8IUX4 373 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 KSR1Q8IVT5 923 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 RPUSD2Q8IZ73 545 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 SCYL3Q8IZE3 742 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 NSUN6Q8TEA1 469 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 MAIP1Q8WWC4 291 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 CASKIN2Q8WXE0 1202 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 ZBED3Q96IU2 234 aaPredicted RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 SENP7Q9BQF6 1050 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 PDCD2LQ9BRP1 358 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 MOV10L1Q9BXT6 1211 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 FAM129AQ9BZQ8 928 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 WNT8AQ9H1J5 351 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 PCIF1Q9H4Z3 704 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 ATP6V0A4Q9HBG4 840 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 KIAA1586Q9HCI6 787 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 TMEM8AQ9HCN3 771 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 POLD4Q9HCU8 107 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 C1orf112Q9NSG2 853 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 WRAP73Q9P2S5 460 aaPredicted RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 MTRF1LQ9UGC7 380 aaKnown RBP8.6□□□□□ -1.03
SMC4-212ENST00000470240 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 TBX20Q9UMR3 447 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 USP20Q9Y2K6 914 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 STXBP5LQ9Y2K9 1186 aa8.6□□□□□ -1.03
SMC4-212ENST00000470240 ASTN2O75129 1339 aaPredicted RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 NFASCO94856 1347 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 IGSF9BQ9UPX0 1349 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 TTLL8A6PVC2 850 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 PHF20L1A8MW92 1017 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 AGPSO00116 658 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 EBAG9O00559 213 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 BACH1O14867 736 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 ZBTB39O15060 712 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 SLC16A4O15374 487 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 DHX15O43143 795 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 SART1O43290 800 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 BUB1BO60566 1050 aaPredicted RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 SHOX2O60902 331 aaPredicted RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 FGGP02679 453 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 GZMAP12544 262 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 GARTP22102 1010 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 CHRNA3P32297 505 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 CTNNA1P35221 906 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 GCLMP48507 274 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 CARSP49589 748 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 EIF3BP55884 814 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 BPIFB4P59827 614 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 DR1Q01658 176 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 IFFO1Q0D2I5 559 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 STRN3Q13033 797 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 ITGB3BPQ13352 177 aaPredicted RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 SNRNP35Q16560 246 aaKnown RBP8.59□□□□□ -1.03
SMC4-212ENST00000470240 NBPF9Q3BBW0 867 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 WDR44Q5JSH3 913 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 MIS18BP1Q6P0N0 1132 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 SLC30A10Q6XR72 485 aa8.59□□□□□ -1.03
SMC4-212ENST00000470240 B4GALNT4Q76KP1 1039 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms