RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 PLCD3Q8N3E9 789 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 HASPINQ8TF76 798 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 PIK3R5Q8WYR1 880 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 ZNF707Q96C28 371 aaPredicted RBP17.92■□□□□ 0.46
COL9A3-208ENST00000469802 NTPCRQ9BSD7 190 aaKnown RBP17.92■□□□□ 0.46
COL9A3-208ENST00000469802 NT5C3AQ9H0P0 336 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 PLEKHA4Q9H4M7 779 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 SMC3Q9UQE7 1217 aa17.92■□□□□ 0.46
COL9A3-208ENST00000469802 TGM5O43548 720 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 RFPL2O75678 378 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 ASGR2P07307 311 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 SLC12A3P55017 1021 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 XKR4Q5GH76 650 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 ELMSAN1Q6PJG2 1045 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 PRSS55Q6UWB4 352 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-208ENST00000469802 OTOP3Q7RTS5 596 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 CEP120Q8N960 986 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 SYT2Q8N9I0 419 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-208ENST00000469802 TTPALQ9BTX7 342 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 MRPL4Q9BYD3 311 aaKnown RBP17.91■□□□□ 0.46
COL9A3-208ENST00000469802 SMOC2Q9H3U7 446 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 WDR6Q9NNW5 1121 aaKnown RBP17.91■□□□□ 0.46
COL9A3-208ENST00000469802 KMT5AQ9NQR1 393 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 KCND2Q9NZV8 630 aa17.91■□□□□ 0.46
COL9A3-208ENST00000469802 RBM19Q9Y4C8 960 aaKnown RBP17.91■□□□□ 0.46
COL9A3-208ENST00000469802 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.91■□□□□ 0.46
COL9A3-208ENST00000469802 NOTCH4Q99466 2003 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 CCDC195A0A1B0GUA6 201 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 SLC26A4O43511 780 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 N4BP1O75113 896 aaKnown RBP17.9■□□□□ 0.46
COL9A3-208ENST00000469802 RPL17P18621 184 aaKnown RBP17.9■□□□□ 0.46
COL9A3-208ENST00000469802 NHLH1Q02575 133 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 ELAVL2Q12926 359 aaKnown RBP17.9■□□□□ 0.46
COL9A3-208ENST00000469802 ZNF568Q3ZCX4 644 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 GLRA4Q5JXX5 417 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 FAM171A1Q5VUB5 890 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 ALKAL1Q6UXT8 129 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 PALB2Q86YC2 1186 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 SUGP1Q8IWZ8 645 aaKnown RBP17.9■□□□□ 0.46
COL9A3-208ENST00000469802 LNX1Q8TBB1 728 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-208ENST00000469802 SPIRE2Q8WWL2 714 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 ACSF2Q96CM8 615 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-208ENST00000469802 AK8Q96MA6 479 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 TARS2Q9BW92 718 aaKnown RBP17.9■□□□□ 0.46
COL9A3-208ENST00000469802 ZDHHC7Q9NXF8 308 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 LIMD1Q9UGP4 676 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 FBXW11Q9UKB1 542 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 CLUHO75153 1309 aa17.9■□□□□ 0.46
COL9A3-208ENST00000469802 ANK1P16157 1881 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 SPATA31D3P0C874 917 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 MCF2P10911 925 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 PLS3P13797 630 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 IGFBP6P24592 240 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-208ENST00000469802 CUL4AQ13619 759 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 ZRSR1Q15695 479 aaKnown RBP17.89■□□□□ 0.45
COL9A3-208ENST00000469802 PSMD5Q16401 504 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 LARP1BQ659C4 914 aaKnown RBP17.89■□□□□ 0.45
COL9A3-208ENST00000469802 CD300LGQ6UXG3 332 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-208ENST00000469802 SPATA31D4Q6ZUB0 917 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 GLYCTKQ8IVS8 523 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 TMEM161BQ8NDZ6 487 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 PRSS33Q8NF86 280 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 KCNN1Q92952 543 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 SNX27Q96L92 541 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 UROC1Q96N76 676 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 CLSTN3Q9BQT9 956 aa17.89■□□□□ 0.45
COL9A3-208ENST00000469802 TOPORSQ9NS56 1045 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-208ENST00000469802 SMIM28A0A1B0GU29 152 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 SFI1A8K8P3 1242 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 SLC16A4O15374 487 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 MEFVO15553 781 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-208ENST00000469802 PDGFBP01127 241 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-208ENST00000469802 PLA2G4BP0C869 781 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 MAPTP10636 758 aaKnown RBP17.88■□□□□ 0.45
COL9A3-208ENST00000469802 FGFR3P22607 806 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 CLCNKBP51801 687 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 VCPP55072 806 aaKnown RBP17.88■□□□□ 0.45
COL9A3-208ENST00000469802 SOX4Q06945 474 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-208ENST00000469802 UPP1Q16831 310 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 IER5LQ5T953 404 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 MPZL3Q6UWV2 235 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 BRAPQ7Z569 592 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 C3orf58Q8NDZ4 430 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 LRRC15Q8TF66 581 aa17.88■□□□□ 0.45
COL9A3-208ENST00000469802 SMG7Q92540 1137 aaKnown RBP17.88■□□□□ 0.45
COL9A3-208ENST00000469802 CCDC94Q9BW85 323 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-208ENST00000469802 ZMYND10O75800 440 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 BMP15O95972 392 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 MYBP10242 640 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 KCNE1P15382 129 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 YARSP54577 528 aaKnown RBP17.87■□□□□ 0.45
COL9A3-208ENST00000469802 RAD51AP2Q09MP3 1159 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 ARSHQ5FYA8 562 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 PDXDC1Q6P996 788 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 STAMQ92783 540 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 CDK5RAP3Q96JB5 506 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 ZMAT2Q96NC0 199 aaKnown RBP17.87■□□□□ 0.45
COL9A3-208ENST00000469802 PLIN2Q99541 437 aa17.87■□□□□ 0.45
COL9A3-208ENST00000469802 PRKD2Q9BZL6 878 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms