RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 POMGNT1Q8WZA1 660 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 IDI2Q9BXS1 227 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.92□□□□□ -0.34
VARS2-205ENST00000469358 LARSQ9P2J5 1176 aaKnown RBP12.92□□□□□ -0.34
VARS2-205ENST00000469358 USP15Q9Y4E8 981 aaPredicted RBP12.92□□□□□ -0.34
VARS2-205ENST00000469358 AFF2P51816 1311 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 SPAG7O75391 227 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 VIL1P09327 827 aaKnown RBP12.92□□□□□ -0.34
VARS2-205ENST00000469358 RRM1P23921 792 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 GBP2P32456 591 aaPredicted RBP12.92□□□□□ -0.34
VARS2-205ENST00000469358 RARRES1P49788 294 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 MGAT5Q09328 741 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 AOC3Q16853 763 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 TNFAIP8L3Q5GJ75 292 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 BTNL9Q6UXG8 535 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 LDHDQ86WU2 507 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 KIF9Q9HAQ2 790 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
VARS2-205ENST00000469358 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
VARS2-205ENST00000469358 THAP12O43422 761 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 SSR1P43307 286 aaKnown RBP12.91□□□□□ -0.34
VARS2-205ENST00000469358 HADHBP55084 474 aaKnown RBP12.91□□□□□ -0.34
VARS2-205ENST00000469358 RNASELQ05823 741 aaKnown RBP12.91□□□□□ -0.34
VARS2-205ENST00000469358 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 SNRNP35Q16560 246 aaKnown RBP12.91□□□□□ -0.34
VARS2-205ENST00000469358 SPDYCQ5MJ68 293 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 VEZTQ9HBM0 779 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 UPP2O95045 317 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 ANP32DO95626 131 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 IVDP26440 423 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 MAPK4P31152 587 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 PDE6BP35913 854 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 PDE6CP51160 858 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 SLC9A9Q8IVB4 645 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 GLIS1Q8NBF1 620 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 HELQQ8TDG4 1101 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 KCNV2Q8TDN2 545 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 ACCSQ96QU6 501 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 SPATA31A6Q5VVP1 1343 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 GRIN3BO60391 1043 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 CYP1A2P05177 515 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 NQO1P15559 274 aaKnown RBP12.91□□□□□ -0.34
VARS2-205ENST00000469358 PAX7P23759 505 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 ATP13A4Q4VNC1 1196 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 SCARA3Q6AZY7 606 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 TAOK1Q7L7X3 1001 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 ANKLE1Q8NAG6 615 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 KLHL29Q96CT2 875 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 TGS1Q96RS0 853 aaKnown RBP12.91□□□□□ -0.34
VARS2-205ENST00000469358 NINJ2Q9NZG7 142 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 PARP2Q9UGN5 583 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 STK24Q9Y6E0 443 aa12.91□□□□□ -0.34
VARS2-205ENST00000469358 ZSCAN5DPP0CG00 497 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 RALAP11233 206 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 CD58P19256 250 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 FOXN2P32314 431 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 PSMC4P43686 418 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 SP4Q02446 784 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 SPOPLQ6IQ16 392 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 TAB3Q8N5C8 712 aaPredicted RBP12.9□□□□□ -0.34
VARS2-205ENST00000469358 SHC3Q92529 594 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 ACSF2Q96CM8 615 aaPredicted RBP12.9□□□□□ -0.34
VARS2-205ENST00000469358 HOMER3Q9NSC5 361 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 PI4K2BG5E9Z4 385 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 ATP9AO75110 1047 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 OAS1P00973 400 aaKnown RBP12.9□□□□□ -0.34
VARS2-205ENST00000469358 HSPA6P17066 643 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 EIF2AK2P19525 551 aaKnown RBP12.9□□□□□ -0.34
VARS2-205ENST00000469358 B3GNT9Q6UX72 402 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 DDX1Q92499 740 aaKnown RBP12.9□□□□□ -0.34
VARS2-205ENST00000469358 MXRA8Q9BRK3 442 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 NAALADL1Q9UQQ1 740 aa12.9□□□□□ -0.34
VARS2-205ENST00000469358 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.9□□□□□ -0.34
VARS2-205ENST00000469358 DHX15O43143 795 aaKnown RBP12.9□□□□□ -0.35
VARS2-205ENST00000469358 DIAPH2O60879 1101 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 TTC4O95801 387 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 PLS3P13797 630 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 ETS1P14921 441 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 CDR2Q01850 454 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 TMEM63BQ5T3F8 832 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 TLDC1Q6P9B6 456 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 RHBDF2Q6PJF5 856 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 SPATA21Q7Z572 469 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 ERICH1Q86X53 443 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 LBHD1Q9BQE6 289 aaPredicted RBP12.9□□□□□ -0.35
VARS2-205ENST00000469358 LRRC19Q9H756 370 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 SLCO1B3Q9NPD5 702 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 ANAPC5Q9UJX4 755 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 GTF3C4Q9UKN8 822 aa12.9□□□□□ -0.35
VARS2-205ENST00000469358 MROH7Q68CQ1 1323 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 MYCLP12524 364 aaPredicted RBP12.89□□□□□ -0.35
VARS2-205ENST00000469358 TCF4P15884 667 aa12.89□□□□□ -0.35
VARS2-205ENST00000469358 YWHABP31946 246 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms