RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 ZFP14Q9HCL3 533 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 SUCLA2Q9P2R7 463 aaPredicted RBP14.13□□□□□ -0.15
HDAC6-217ENST00000469223 HES2Q9Y543 173 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 IPPQ9Y573 584 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 NCANO14594 1321 aa14.13□□□□□ -0.15
HDAC6-217ENST00000469223 PIEZO2Q9H5I5 2752 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 SLC38A8A6NNN8 435 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 CSRP1P21291 193 aaKnown RBP14.12□□□□□ -0.15
HDAC6-217ENST00000469223 HOXA6P31267 233 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 DNM2P50570 870 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 SETQ01105 290 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-217ENST00000469223 AP3B2Q13367 1082 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 SMC5Q8IY18 1101 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 PIK3R5Q8WYR1 880 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 APOL6Q9BWW8 343 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 EIF2AQ9BY44 585 aaKnown RBP14.12□□□□□ -0.15
HDAC6-217ENST00000469223 MINDY3Q9H8M7 445 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 UBN1Q9NPG3 1134 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 TRPV5Q9NQA5 729 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 KIAA1549LQ6ZVL6 1849 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 SHROOM3Q8TF72 1996 aa14.12□□□□□ -0.15
HDAC6-217ENST00000469223 NUP210Q8TEM1 1887 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-217ENST00000469223 IGKV6-21A0A0C4DH24 114 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 CHMP2AO43633 222 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 EXTL3O43909 919 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 IGHDP01880 384 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 CYP21A2P08686 494 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 PSMC3P17980 439 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 HOXA11P31270 313 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-217ENST00000469223 CREB5Q02930 508 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 CEP57Q86XR8 500 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 IGDCC4Q8TDY8 1250 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 TCEAL4Q96EI5 215 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 ASB16Q96NS5 453 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 CEP89Q96ST8 783 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 TTPALQ9BTX7 342 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 IFT122Q9HBG6 1241 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 TMEM9BQ9NQ34 198 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 DISC1Q9NRI5 854 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 MYO16Q9Y6X6 1858 aa14.11□□□□□ -0.15
HDAC6-217ENST00000469223 E7EWF7 191 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 ARNTLO00327 626 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 TADA2AO75478 443 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 FGD1P98174 961 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 HSP90AA2PQ14568 343 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-217ENST00000469223 PLK5Q496M5 336 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 FAM171A1Q5VUB5 890 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 PPP1R18Q6NYC8 613 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 TXNDC11Q6PKC3 985 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 CNNM3Q8NE01 707 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 NCOA7Q8NI08 942 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 LNX1Q8TBB1 728 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-217ENST00000469223 PAAF1Q9BRP4 392 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 MKNK1Q9BUB5 465 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 LNPKQ9C0E8 428 aa14.1□□□□□ -0.15
HDAC6-217ENST00000469223 USP9XQ93008 2570 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-217ENST00000469223 WDR27A2RRH5 827 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 ZNF263O14978 683 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 KIF4AO95239 1232 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 VIPR2P41587 438 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 UAP1L1Q3KQV9 507 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 PRSS36Q5K4E3 855 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 DGKKQ5KSL6 1271 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 PKN3Q6P5Z2 889 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 NFXL1Q6ZNB6 911 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 CHD1LQ86WJ1 897 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 MB21D2Q8IYB1 491 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-217ENST00000469223 CSGALNACT1Q8TDX6 532 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 DEPDC1BQ8WUY9 529 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 MSANTD3Q96H12 275 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 ZC3H10Q96K80 434 aaKnown RBP14.09□□□□□ -0.15
HDAC6-217ENST00000469223 NXF3Q9H4D5 531 aaKnown RBP14.09□□□□□ -0.15
HDAC6-217ENST00000469223 AVENQ9NQS1 362 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-217ENST00000469223 COL4A3BPQ9Y5P4 624 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 ADAMTS9Q9P2N4 1935 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 CNTNAP5Q8WYK1 1306 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 TRIP11Q15643 1979 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 GON4LQ3T8J9 2241 aa14.09□□□□□ -0.15
HDAC6-217ENST00000469223 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.15
HDAC6-217ENST00000469223 AKAP3O75969 853 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CAVIN2O95810 425 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CAPNS1P04632 268 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CALM1P0DP23 149 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CALM2P0DP24 149 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CALM3P0DP25 149 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 OR1D2P34982 312 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CLK2P49760 499 aaKnown RBP14.08□□□□□ -0.16
HDAC6-217ENST00000469223 KPNA1P52294 538 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-217ENST00000469223 GRIK3Q13003 919 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 UVSSAQ2YD98 709 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 PRR16Q569H4 304 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 GLIS3Q8NEA6 775 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 FAM200AQ8TCP9 573 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CRYGNQ8WXF5 182 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 SMARCD2Q92925 531 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CORO1BQ9BR76 489 aa14.08□□□□□ -0.16
HDAC6-217ENST00000469223 DUSP15Q9H1R2 295 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-217ENST00000469223 CACNA2D2Q9NY47 1150 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms