RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 P3H4Q92791 437 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 HVCN1Q96D96 273 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 RUNDC3BQ96NL0 473 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 TMEM109Q9BVC6 243 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 PMM2O15305 246 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 CYP11B1P15538 503 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 TKFCQ3LXA3 575 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 FBXO41Q8TF61 875 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 POP1Q99575 1024 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 CCDC113Q9H0I3 377 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 KDM4CQ9H3R0 1056 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 AGO4Q9HCK5 861 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 CD248Q9HCU0 757 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 HAUS2Q9NVX0 235 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 HACL1Q9UJ83 578 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 GTF3C4Q9UKN8 822 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 USP20Q9Y2K6 914 aa16.91■□□□□ 0.3
TSPAN4-211ENST00000468468 ECEL1O95672 775 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 SPP2Q13103 211 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 PPP1R7Q15435 360 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 SNRNP35Q16560 246 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 LRRC34Q8IZ02 419 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 SAAL1Q96ER3 474 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 PRMT1Q99873 361 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 JPH2Q9BR39 696 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 ST6GALNAC4Q9H4F1 302 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 FZD1Q9UP38 647 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 ICAM1P05362 532 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 TNFAIP1Q13829 316 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 NBPF12Q5TAG4 269 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 PRAMEF18Q5VWM3 479 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 KRT39Q6A163 491 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 EGFL6Q8IUX8 553 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 IWS1Q96ST2 819 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 STMN4Q9H169 189 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 HOMER2Q9NSB8 354 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 UVRAGQ9P2Y5 699 aa16.9■□□□□ 0.3
TSPAN4-211ENST00000468468 CCT8L1PA6NM43 557 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 CLDN3O15551 220 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 ASAP2O43150 1006 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 DLATP10515 647 aaKnown RBP16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 PDE6CP51160 858 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 SNRPFP62306 86 aaKnown RBP16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 CDR2Q01850 454 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 CALCOCO2Q13137 446 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 MKRN4PQ13434 485 aaPredicted RBP16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 AUHQ13825 339 aaKnown RBP16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 FAM102BQ5T8I3 360 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 FUKQ8N0W3 1084 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 ANKS4BQ8N8V4 417 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 HELQQ8TDG4 1101 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 C1orf54Q8WWF1 131 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 ELMO3Q96BJ8 720 aa16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 RAVER2Q9HCJ3 691 aaKnown RBP16.89■□□□□ 0.3
TSPAN4-211ENST00000468468 CHUKO15111 745 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 GHRP10912 638 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 ADSSP30520 456 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 NCKAP1LP55160 1127 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 UGCGQ16739 394 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 CCDC38Q502W7 563 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 NIPA1Q7RTP0 329 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 C12orf50Q8NA57 414 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 LRRC19Q9H756 370 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 UBIAD1Q9Y5Z9 338 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 WDR46O15213 610 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 LYPLA2O95372 231 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 VIMP08670 466 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 IBSPP21815 317 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 IFNAR2P48551 515 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 MRPS9P82933 396 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 MTMR1Q13613 665 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 MTMR2Q13614 643 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 CYB5D1Q6P9G0 228 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 PIGWQ7Z7B1 504 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 NT5C1BQ96P26 610 aa16.89■□□□□ 0.29
TSPAN4-211ENST00000468468 BRCA1P38398 1863 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 RPS12P25398 132 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 SNX1Q13596 522 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 ACAD10Q6JQN1 1059 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 TAOK1Q7L7X3 1001 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 PSPC1Q8WXF1 523 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 DHX38Q92620 1227 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 ELAC2Q9BQ52 826 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 TMEM8AQ9HCN3 771 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 TOPORSQ9NS56 1045 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 SAMD15Q9P1V8 674 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 EXOC7Q9UPT5 735 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 ECM2O94769 699 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 SGO2Q562F6 1265 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 XKR9Q5GH70 373 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 TNFAIP8L3Q5GJ75 292 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 PLA2G4FQ68DD2 849 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 RPAINQ86UA6 219 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 PARP9Q8IXQ6 854 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms