RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 TOPORSQ9NS56 1045 aaPredicted RBP14.86□□□□□ -0.03
SSBP1-206ENST00000467681 EXOC1Q9NV70 894 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 LZTS1Q9Y250 596 aa14.86□□□□□ -0.03
SSBP1-206ENST00000467681 NRP1O14786 923 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 ADRB2P07550 413 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 GARTP22102 1010 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 POU5F1Q01860 360 aaKnown RBP14.85□□□□□ -0.03
SSBP1-206ENST00000467681 TUSC3Q13454 348 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 NAB2Q15742 525 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 BMT2Q1RMZ1 405 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 ZBTB41Q5SVQ8 909 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 POMGNT1Q8WZA1 660 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 CCDC47Q96A33 483 aaKnown RBP14.85□□□□□ -0.03
SSBP1-206ENST00000467681 SNX27Q96L92 541 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 PPP1R10Q96QC0 940 aaKnown RBP14.85□□□□□ -0.03
SSBP1-206ENST00000467681 COLEC11Q9BWP8 271 aa14.85□□□□□ -0.03
SSBP1-206ENST00000467681 RPF1Q9H9Y2 349 aaKnown RBP14.85□□□□□ -0.03
SSBP1-206ENST00000467681 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
SSBP1-206ENST00000467681 AGO2Q9UKV8 859 aaKnown RBP14.85□□□□□ -0.03
SSBP1-206ENST00000467681 BRWD1Q9NSI6 2320 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 TTC26A0AVF1 554 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 RHOBTB3O94955 611 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 TNFSF9P41273 254 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 OR1G1P47890 313 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 SNRPFP62306 86 aaKnown RBP14.84□□□□□ -0.03
SSBP1-206ENST00000467681 KCNB1Q14721 858 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 DDX53Q86TM3 631 aaKnown RBP14.84□□□□□ -0.03
SSBP1-206ENST00000467681 TMEM173Q86WV6 379 aaPredicted RBP14.84□□□□□ -0.03
SSBP1-206ENST00000467681 MAFAQ8NHW3 353 aaPredicted RBP14.84□□□□□ -0.03
SSBP1-206ENST00000467681 TMEM169Q96HH4 297 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 ZMAT2Q96NC0 199 aaKnown RBP14.84□□□□□ -0.03
SSBP1-206ENST00000467681 TSPAN18Q96SJ8 248 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 CNTN3Q9P232 1028 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 HOOK1Q9UJC3 728 aaKnown RBP14.84□□□□□ -0.03
SSBP1-206ENST00000467681 UBE4BO95155 1302 aa14.84□□□□□ -0.03
SSBP1-206ENST00000467681 LACTBL1A8MY62 500 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 TGFB1I1O43294 461 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 KINO60870 393 aaKnown RBP14.83□□□□□ -0.04
SSBP1-206ENST00000467681 SLC34A2O95436 690 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 CXCL8P10145 99 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 ACOT2P49753 483 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 ERVFC1P60507 584 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 PNOCQ13519 176 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 ZBTB6Q15916 424 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 ENOX2Q16206 610 aaKnown RBP14.83□□□□□ -0.04
SSBP1-206ENST00000467681 KNOP1Q1ED39 458 aaKnown RBP14.83□□□□□ -0.04
SSBP1-206ENST00000467681 GLRA4Q5JXX5 417 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 PDE12Q6L8Q7 609 aaKnown RBP14.83□□□□□ -0.04
SSBP1-206ENST00000467681 CRELD2Q6UXH1 353 aaPredicted RBP14.83□□□□□ -0.04
SSBP1-206ENST00000467681 CD302Q8IX05 232 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 KIAA0895Q8NCT3 520 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 SPATA20Q8TB22 786 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 MICAL1Q8TDZ2 1067 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 BCL7CQ8WUZ0 217 aaPredicted RBP14.83□□□□□ -0.04
SSBP1-206ENST00000467681 DDX27Q96GQ7 796 aaKnown RBP14.83□□□□□ -0.04
SSBP1-206ENST00000467681 CBWD1Q9BRT8 395 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 SLC38A7Q9NVC3 462 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 PCDHA5Q9Y5H7 936 aa14.83□□□□□ -0.04
SSBP1-206ENST00000467681 TRIP11Q15643 1979 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 FSCN2O14926 492 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 KIAA0391O15091 583 aaKnown RBP14.82□□□□□ -0.04
SSBP1-206ENST00000467681 SMC2O95347 1197 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 EFEMP2O95967 443 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 LDHAP00338 332 aaKnown RBP14.82□□□□□ -0.04
SSBP1-206ENST00000467681 IRS1P35568 1242 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 CCDC85BQ15834 202 aaPredicted RBP14.82□□□□□ -0.04
SSBP1-206ENST00000467681 DCLRE1AQ6PJP8 1040 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 NELFCDQ8IXH7 590 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 GSDMAQ96QA5 445 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 TLR9Q9NR96 1032 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 MARCH5Q9NX47 278 aa14.82□□□□□ -0.04
SSBP1-206ENST00000467681 CGNQ9P2M7 1197 aaKnown RBP14.82□□□□□ -0.04
SSBP1-206ENST00000467681 PRG3Q9Y2Y8 225 aaPredicted RBP14.82□□□□□ -0.04
SSBP1-206ENST00000467681 CASTOR2A6NHX0 329 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 EXTL3O43909 919 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 TADA2AO75478 443 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 RPL9P32969 192 aaKnown RBP14.81□□□□□ -0.04
SSBP1-206ENST00000467681 SOX4Q06945 474 aaPredicted RBP14.81□□□□□ -0.04
SSBP1-206ENST00000467681 TIGD5Q53EQ6 642 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 ARMCX5Q6P1M9 558 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 HS2ST1Q7LGA3 356 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 VPS52Q8N1B4 723 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 MICALL1Q8N3F8 863 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 MRPL43Q8N983 215 aaKnown RBP14.81□□□□□ -0.04
SSBP1-206ENST00000467681 ZSWIM2Q8NEG5 633 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 PPM1EQ8WY54 764 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 RABGGTAQ92696 567 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 UROC1Q96N76 676 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 GBP4Q96PP9 640 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 PAAF1Q9BRP4 392 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 FAM213AQ9BRX8 229 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 VN1R3Q9BXE9 311 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 PCIF1Q9H4Z3 704 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 NSUN3Q9H649 340 aaKnown RBP14.81□□□□□ -0.04
SSBP1-206ENST00000467681 ASB7Q9H672 318 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 NGRNQ9NPE2 291 aaKnown RBP14.81□□□□□ -0.04
SSBP1-206ENST00000467681 AGPAT3Q9NRZ7 376 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 LMBRD1Q9NUN5 540 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 CACNG4Q9UBN1 327 aa14.81□□□□□ -0.04
SSBP1-206ENST00000467681 STK39Q9UEW8 545 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms