RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 JPH2Q9BR39 696 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-203ENST00000467533 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
HDAC3-203ENST00000467533 TRIM6Q9C030 488 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-203ENST00000467533 MINDY3Q9H8M7 445 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 C2orf42Q9NWW7 574 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 SLC12A7Q9Y666 1083 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 IGSF10Q6WRI0 2623 aa11.44□□□□□ -0.58
HDAC3-203ENST00000467533 LAMA1P25391 3075 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 DMXL2Q8TDJ6 3036 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 SLC38A8A6NNN8 435 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 hCG_1984214I3L0E3 225 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 HYAL3O43820 417 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-203ENST00000467533 MAFO75444 373 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-203ENST00000467533 LRG1P02750 347 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 SRGAP2CP0DJJ0 459 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 CEACAM1P13688 526 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 HOXA6P31267 233 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 PXNP49023 591 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-203ENST00000467533 KPNA1P52294 538 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-203ENST00000467533 PTH1RQ03431 593 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 DGKKQ5KSL6 1271 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 NOTUMQ6P988 496 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 PDXDC1Q6P996 788 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 C1orf228Q6PIY5 440 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 POTEHQ6S545 545 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 TMTC2Q8N394 836 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 ZNF713Q8N859 430 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-203ENST00000467533 FANCBQ8NB91 859 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 ASB16Q96NS5 453 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 TEKT3Q9BXF9 490 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 UNC45AQ9H3U1 944 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 NXF3Q9H4D5 531 aaKnown RBP11.43□□□□□ -0.58
HDAC3-203ENST00000467533 BARHL2Q9NY43 387 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 GIT1Q9Y2X7 761 aa11.43□□□□□ -0.58
HDAC3-203ENST00000467533 SDK1Q7Z5N4 2213 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 DDX11L8A8MPP1 907 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 KIF4AO95239 1232 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 SEC24BO95487 1268 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 PTPN2P17706 415 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 CSRP1P21291 193 aaKnown RBP11.42□□□□□ -0.58
HDAC3-203ENST00000467533 AKAP5P24588 427 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 OR1D2P34982 312 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 SOX9P48436 509 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 CREB5Q02930 508 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 RAB33AQ14088 237 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 LRCH2Q5VUJ6 765 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 MIER3Q7Z3K6 550 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 PSPC1Q8WXF1 523 aaKnown RBP11.42□□□□□ -0.58
HDAC3-203ENST00000467533 TCEAL4Q96EI5 215 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 CCDC51Q96ER9 411 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 CPB2Q96IY4 423 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 TMEM87BQ96K49 555 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 CORO1BQ9BR76 489 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 PAAF1Q9BRP4 392 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 AVENQ9NQS1 362 aaPredicted RBP11.42□□□□□ -0.58
HDAC3-203ENST00000467533 KLK14Q9P0G3 267 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 KLK13Q9UKR3 277 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 MSRB2Q9Y3D2 182 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 ARID2Q68CP9 1835 aa11.42□□□□□ -0.58
HDAC3-203ENST00000467533 KIF26AQ9ULI4 1882 aaPredicted RBP11.41□□□□□ -0.58
HDAC3-203ENST00000467533 LNP1A1A4G5 178 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 WDR27A2RRH5 827 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 CASTOR2A6NHX0 329 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 NRG2O14511 850 aaPredicted RBP11.41□□□□□ -0.58
HDAC3-203ENST00000467533 ZNF197O14709 1029 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 TSPAN1O60635 241 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 AKAP3O75969 853 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 AXLP30530 894 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 MCM5P33992 734 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 ELF2Q15723 593 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 COL28A1Q2UY09 1125 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 PRSS36Q5K4E3 855 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 PDZD4Q76G19 769 aaPredicted RBP11.41□□□□□ -0.58
HDAC3-203ENST00000467533 RTL10Q7L3V2 364 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 PROSER1Q86XN7 944 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 PLEKHM2Q8IWE5 1019 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 YAF2Q8IY57 180 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 DEFB124Q8NES8 71 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 SLC7A3Q8WY07 619 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 SMARCD2Q92925 531 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 LENG9Q96B70 501 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 CSRNP2Q9H175 543 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 OSBPL3Q9H4L5 887 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 C8orf33Q9H7E9 229 aaPredicted RBP11.41□□□□□ -0.58
HDAC3-203ENST00000467533 TMEM9BQ9NQ34 198 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 BMP2KQ9NSY1 1161 aaPredicted RBP11.41□□□□□ -0.58
HDAC3-203ENST00000467533 GPSM3Q9Y4H4 160 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 CDY1Q9Y6F8 540 aa11.41□□□□□ -0.58
HDAC3-203ENST00000467533 MAST4O15021 2626 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 NCANO14594 1321 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 MSH4O15457 936 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 EXTL3O43909 919 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 STBD1O95210 358 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 CAVIN2O95810 425 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 VIPR2P41587 438 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 MLLT6P55198 1093 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms