RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ARL5CA6NH57 179 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 MEIS3P2A8K0S8 358 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 IKBKBO14920 756 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-205ENST00000466897 AKAP3O75969 853 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 CXCL8P10145 99 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 KCNE1P15382 129 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 ATP2A2P16615 1042 aaKnown RBP16.51■□□□□ 0.23
NPHP4-205ENST00000466897 AKAP5P24588 427 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 MARSP56192 900 aaKnown RBP16.51■□□□□ 0.23
NPHP4-205ENST00000466897 STX17P56962 302 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 OSTNP61366 133 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 MYL5Q02045 173 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 PPP2R3AQ06190 1150 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 PSMD6Q15008 389 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 SEZ6Q53EL9 994 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 NT5DC4Q86YG4 428 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 CBWD2Q8IUF1 395 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 HERC6Q8IVU3 1022 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 TDHQ8IZJ6 230 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 GSTCDQ8NEC7 633 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 LPPQ93052 612 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 MRPL9Q9BYD2 267 aaKnown RBP16.51■□□□□ 0.23
NPHP4-205ENST00000466897 KANSL3Q9P2N6 904 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 PARP2Q9UGN5 583 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 C2CD2Q9Y426 696 aa16.51■□□□□ 0.23
NPHP4-205ENST00000466897 GOLGA8IPA6NC78 632 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 GOLGA8JA6NMD2 632 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
NPHP4-205ENST00000466897 FGFR1P11362 822 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 MLH1P40692 756 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 CASP4P49662 377 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 ZNF165P49910 485 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 CLDN10P78369 228 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 CYP24A1Q07973 514 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 NOMO2Q5JPE7 1267 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 CEP135Q66GS9 1140 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 INTS8Q75QN2 995 aaKnown RBP16.5■□□□□ 0.23
NPHP4-205ENST00000466897 USP37Q86T82 979 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 FAM186BQ8IYM0 893 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 CMTR2Q8IYT2 770 aaKnown RBP16.5■□□□□ 0.23
NPHP4-205ENST00000466897 ABI1Q8IZP0 508 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 RNF169Q8NCN4 708 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 URGCPQ8TCY9 931 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 TMC2Q8TDI7 906 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 BORCS6Q96GS4 357 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 CASD1Q96PB1 797 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 RPS6KC1Q96S38 1066 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 GAD1Q99259 594 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 APOL6Q9BWW8 343 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 GZF1Q9H116 711 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-205ENST00000466897 THAP9Q9H5L6 903 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
NPHP4-205ENST00000466897 INSL6Q9Y581 213 aa16.5■□□□□ 0.23
NPHP4-205ENST00000466897 UPP2O95045 317 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 GRIK3Q13003 919 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 FAM114A1Q8IWE2 563 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 LRRC43Q8N309 656 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
NPHP4-205ENST00000466897 HELQQ8TDG4 1101 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 ZFP42Q96MM3 310 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 RAD9AQ99638 391 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 SRRTQ9BXP5 876 aaKnown RBP16.49■□□□□ 0.23
NPHP4-205ENST00000466897 TSPY26PQ9H489 355 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 NFE2L3Q9Y4A8 694 aa16.49■□□□□ 0.23
NPHP4-205ENST00000466897 SMIM28A0A1B0GU29 152 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 CARNS1A5YM72 827 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 SMTNL1A8MU46 457 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 LACTBL1A8MY62 500 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 PTGESO14684 152 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 BFSP1Q12934 665 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 NCAPHQ15003 741 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 ZBTB6Q15916 424 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 TPD52L1Q16890 204 aaPredicted RBP16.48■□□□□ 0.23
NPHP4-205ENST00000466897 CHRDL2Q6WN34 429 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 WDR49Q8IV35 697 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 PARD3BQ8TEW8 1205 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 PPP1R10Q96QC0 940 aaKnown RBP16.48■□□□□ 0.23
NPHP4-205ENST00000466897 YME1L1Q96TA2 773 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 KLK14Q9P0G3 267 aa16.48■□□□□ 0.23
NPHP4-205ENST00000466897 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-205ENST00000466897 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
NPHP4-205ENST00000466897 XPOTO43592 962 aaKnown RBP16.47■□□□□ 0.23
NPHP4-205ENST00000466897 THP07101 528 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 KRT13P13646 458 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 CYP3A5P20815 502 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 AP3M2P53677 418 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 DSC1Q08554 894 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 IQCB1Q15051 598 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 NAB2Q15742 525 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 HABP4Q5JVS0 413 aaKnown RBP16.47■□□□□ 0.23
NPHP4-205ENST00000466897 CDKAL1Q5VV42 579 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 IRF2BP1Q8IU81 584 aa16.47■□□□□ 0.23
NPHP4-205ENST00000466897 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
NPHP4-205ENST00000466897 ZMAT2Q96NC0 199 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms