RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZNF233A6NK53 670 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 TBKBP1A7MCY6 615 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 MEFVO15553 781 aaPredicted RBP17.4■□□□□ 0.38
GPC1-207ENST00000466624 EXOC3O60645 756 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 IL18RAPO95256 599 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 CXCL8P10145 99 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 KCNE1P15382 129 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 PMS1P54277 932 aaKnown RBP17.4■□□□□ 0.38
GPC1-207ENST00000466624 FKBP3Q00688 224 aaKnown RBP17.4■□□□□ 0.38
GPC1-207ENST00000466624 PPP2R3AQ06190 1150 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 GRIK3Q13003 919 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 ADAM9Q13443 819 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 SNRNP35Q16560 246 aaKnown RBP17.4■□□□□ 0.38
GPC1-207ENST00000466624 KLHL10Q6JEL2 608 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 TTI2Q6NXR4 508 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 ZFP42Q96MM3 310 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 MKNK1Q9BUB5 465 aa17.4■□□□□ 0.38
GPC1-207ENST00000466624 CARNS1A5YM72 827 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 GOLGA8IPA6NC78 632 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 GOLGA8JA6NMD2 632 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 GRXCR1A8MXD5 290 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 PTGESO14684 152 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 CETN3O15182 167 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 GATMP50440 423 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 TYRO3Q06418 890 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 BTG3Q14201 252 aaPredicted RBP17.39■□□□□ 0.37
GPC1-207ENST00000466624 SURF1Q15526 300 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 NT5DC4Q86YG4 428 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 CBWD2Q8IUF1 395 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 ZSWIM2Q8NEG5 633 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 PBX4Q9BYU1 374 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 TBC1D13Q9NVG8 400 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 RBAKQ9NYW8 714 aaPredicted RBP17.39■□□□□ 0.37
GPC1-207ENST00000466624 KLK14Q9P0G3 267 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 MSRAQ9UJ68 235 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 INPP5FQ9Y2H2 1132 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 FRMD4BQ9Y2L6 1034 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 DERAQ9Y315 318 aa17.39■□□□□ 0.37
GPC1-207ENST00000466624 TRIOBPQ9H2D6 2365 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 SMIM28A0A1B0GU29 152 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 SYCE3A1L190 88 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 SLC16A3O15427 465 aaKnown RBP17.38■□□□□ 0.37
GPC1-207ENST00000466624 THP07101 528 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 SCNN1GP51170 649 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 AFF1P51825 1210 aaKnown RBP17.38■□□□□ 0.37
GPC1-207ENST00000466624 RABGGTBP53611 331 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 ENPEPQ07075 957 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 ZSCAN23Q3MJ62 389 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 FIBCD1Q8N539 461 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 CLP1Q92989 425 aaKnown RBP17.38■□□□□ 0.37
GPC1-207ENST00000466624 MFSD14AQ96MC6 490 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 CEP63Q96MT8 703 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 PPP1R10Q96QC0 940 aaKnown RBP17.38■□□□□ 0.37
GPC1-207ENST00000466624 DUSP9Q99956 384 aaKnown RBP17.38■□□□□ 0.37
GPC1-207ENST00000466624 FUCA2Q9BTY2 467 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 SLC38A7Q9NVC3 462 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 MIOSQ9NXC5 875 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 C2CD2Q9Y426 696 aa17.38■□□□□ 0.37
GPC1-207ENST00000466624 LACTBL1A8MY62 500 aa17.37■□□□□ 0.37
GPC1-207ENST00000466624 PSMC2P35998 433 aaKnown RBP17.37■□□□□ 0.37
GPC1-207ENST00000466624 MCCD1P59942 119 aaPredicted RBP17.37■□□□□ 0.37
GPC1-207ENST00000466624 CYP24A1Q07973 514 aa17.37■□□□□ 0.37
GPC1-207ENST00000466624 DSC1Q08554 894 aa17.37■□□□□ 0.37
GPC1-207ENST00000466624 PSMD6Q15008 389 aa17.37■□□□□ 0.37
GPC1-207ENST00000466624 NAB2Q15742 525 aa17.37■□□□□ 0.37
GPC1-207ENST00000466624 PAN2Q504Q3 1202 aaKnown RBP17.37■□□□□ 0.37
GPC1-207ENST00000466624 CWH43Q9H720 699 aa17.37■□□□□ 0.37
GPC1-207ENST00000466624 YBX2Q9Y2T7 364 aaKnown RBP17.37■□□□□ 0.37
GPC1-207ENST00000466624 RWDD3Q9Y3V2 267 aa17.37■□□□□ 0.37
GPC1-207ENST00000466624 LCHNA4D1U4 455 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 LINC01553A4QN01 128 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 XPOTO43592 962 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 AKAP3O75969 853 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 FGFR1OPO95684 399 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 POMCP01189 267 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 LINC00271P0C7V0 271 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 CYP3A5P20815 502 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 CASP4P49662 377 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 STX17P56962 302 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 RNASELQ05823 741 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 TUSC3Q13454 348 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 ZBTB6Q15916 424 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 CEP135Q66GS9 1140 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 INTS8Q75QN2 995 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 FILIP1Q7Z7B0 1213 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 CSGALNACT2Q8N6G5 542 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 ZMAT2Q96NC0 199 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 SAMD11Q96NU1 681 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 MED15Q96RN5 788 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 TMEM175Q9BSA9 504 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 CXCL16Q9H2A7 254 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 UBQLN1Q9UMX0 589 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 PLAGL2Q9UPG8 496 aa17.36■□□□□ 0.37
GPC1-207ENST00000466624 MRPL42Q9Y6G3 142 aaKnown RBP17.36■□□□□ 0.37
GPC1-207ENST00000466624 TMEM265A0A087WTH1 108 aa17.35■□□□□ 0.37
GPC1-207ENST00000466624 CA3P07451 260 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms