RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 PROZP22891 400 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 SP100P23497 879 aaPredicted RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 CASP1P29466 404 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 CLCNKBP51801 687 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 SOX4Q06945 474 aaPredicted RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 BECN1Q14457 450 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 HSP90AA2PQ14568 343 aaPredicted RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 BMS1Q14692 1282 aaKnown RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 NOLC1Q14978 699 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD40-204ENST00000466205 NAB2Q15742 525 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 ZBTB41Q5SVQ8 909 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 AXDND1Q5T1B0 1012 aaPredicted RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 FUT10Q6P4F1 479 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 APBB1IPQ7Z5R6 666 aaPredicted RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 FEZF2Q8TBJ5 459 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 HPS3Q969F9 1004 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 MSLNLQ96KJ4 702 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 ZMAT2Q96NC0 199 aaKnown RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 ACAP3Q96P50 834 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 KLHL5Q96PQ7 755 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 CDCA3Q99618 268 aaPredicted RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 HERC2P3Q9BVR0 1158 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 FGFBP2Q9BYJ0 223 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 MRPL44Q9H9J2 332 aaKnown RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 MRPL17Q9NRX2 175 aaKnown RBP11.14□□□□□ -0.63
CD40-204ENST00000466205 KCNG1Q9UIX4 513 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 ADAM28Q9UKQ2 775 aa11.14□□□□□ -0.63
CD40-204ENST00000466205 SMIM28A0A1B0GU29 152 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 ANKRD63C9JTQ0 380 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 H0YCG3 227 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 I3L4J1 428 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 POLR2DO15514 142 aaKnown RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 GCNT3O95395 438 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 CNPP09543 421 aaKnown RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 RPL17P18621 184 aaKnown RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 KLRC2P26717 231 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 SSTR3P32745 418 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 GLUD2P49448 558 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 CASP5P51878 434 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 KCNA1Q09470 495 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 SMAD4Q13485 552 aaKnown RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 HERC4Q5GLZ8 1057 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 KIAA1841Q6NSI8 718 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 ANKRD54Q6NXT1 300 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 SLC39A4Q6P5W5 647 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 PRSS55Q6UWB4 352 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 ZPBP2Q6X784 338 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 C12orf76Q8N812 135 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 RIN2Q8WYP3 895 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 C18orf25Q96B23 403 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 DNAJC19Q96DA6 116 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 SNX27Q96L92 541 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 EMILIN2Q9BXX0 1053 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 BLZF1Q9H2G9 400 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 GDPD2Q9HCC8 539 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 CD320Q9NPF0 282 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 TOPORSQ9NS56 1045 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 PANK4Q9NVE7 773 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 CFAP45Q9UL16 551 aa11.13□□□□□ -0.63
CD40-204ENST00000466205 MORC2Q9Y6X9 1032 aaPredicted RBP11.13□□□□□ -0.63
CD40-204ENST00000466205 MYO7AQ13402 2215 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 B3GAT3O94766 335 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 SPATA31D3P0C874 917 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 SRGAP2BP0DMP2 458 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
CD40-204ENST00000466205 AFMP43652 599 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 BRCC3P46736 316 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 KRT85P78386 507 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 MCL1Q07820 350 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 KCNC3Q14003 757 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 E2F4Q16254 413 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 SLC10A6Q3KNW5 377 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 RTP2Q5QGT7 225 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 RARS2Q5T160 578 aaKnown RBP11.12□□□□□ -0.63
CD40-204ENST00000466205 FAM171A1Q5VUB5 890 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 SYCE2Q6PIF2 218 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 SPATA31D4Q6ZUB0 917 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 MAP4K3Q8IVH8 894 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 GRAMD1CQ8IYS0 662 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 C3orf58Q8NDZ4 430 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 GLIS3Q8NEA6 775 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 NOC3LQ8WTT2 800 aaKnown RBP11.12□□□□□ -0.63
CD40-204ENST00000466205 CASP10Q92851 521 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
CD40-204ENST00000466205 SPATA32Q96LK8 384 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 PPP1R10Q96QC0 940 aaKnown RBP11.12□□□□□ -0.63
CD40-204ENST00000466205 MSTO1Q9BUK6 570 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
CD40-204ENST00000466205 USP15Q9Y4E8 981 aaPredicted RBP11.12□□□□□ -0.63
CD40-204ENST00000466205 CUL9Q8IWT3 2517 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 A0A1B0GVL5 298 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 CARNS1A5YM72 827 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 PODXLO00592 558 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 TEX28O15482 410 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 PRPF6O94906 941 aaKnown RBP11.11□□□□□ -0.63
CD40-204ENST00000466205 ACOT2P49753 483 aa11.11□□□□□ -0.63
CD40-204ENST00000466205 GUCY2FP51841 1108 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms