RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.72□□□□□ -0.53
NPHP3-203ENST00000465756 AGMOQ6ZNB7 445 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 TMCO2Q7Z6W1 182 aaPredicted RBP11.72□□□□□ -0.53
NPHP3-203ENST00000465756 THEM5Q8N1Q8 247 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 EFHBQ8N7U6 833 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 NXF3Q9H4D5 531 aaKnown RBP11.72□□□□□ -0.53
NPHP3-203ENST00000465756 IGFLR1Q9H665 355 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 RC3H2Q9HBD1 1191 aaKnown RBP11.72□□□□□ -0.53
NPHP3-203ENST00000465756 STX10O60499 249 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 SOD2P04179 222 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 TMEM191BP0C7N4 346 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 CTSAP10619 480 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 MCL1Q07820 350 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 DSTYKQ6XUX3 929 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 ANKS3Q6ZW76 656 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 VWCEQ96DN2 955 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 PIDD1Q9HB75 910 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 ADAM28Q9UKQ2 775 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 ZNF233A6NK53 670 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 MCM4P33991 863 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 AFMP43652 599 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 COASYQ13057 564 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 TCEAL5Q5H9L2 206 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 NT5DC1Q5TFE4 455 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 CCDC149Q6ZUS6 474 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 EIF2AQ9BY44 585 aaKnown RBP11.72□□□□□ -0.53
NPHP3-203ENST00000465756 FRMD4BQ9Y2L6 1034 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 WDR81Q562E7 1941 aa11.72□□□□□ -0.53
NPHP3-203ENST00000465756 B4GALT5O43286 388 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 P4HA1P13674 534 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 PLD1Q13393 1074 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 TMEM132DQ14C87 1099 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 ECM1Q16610 540 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 AMHR2Q16671 573 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 TCTN1Q2MV58 587 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 KCNK18Q7Z418 384 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 KIFC3Q9BVG8 833 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 IMPG2Q9BZV3 1241 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 MAFFQ9ULX9 164 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 RALGAPA2Q2PPJ7 1873 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 SYN3O14994 580 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 GRM6O15303 877 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 SLC11A1P49279 550 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
NPHP3-203ENST00000465756 MAPK7Q13164 816 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 LONRF3Q496Y0 759 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 ZNF280DQ6N043 979 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 FUT10Q6P4F1 479 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 ZNF720Q7Z2F6 126 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 SMARCE1Q969G3 411 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 TRIM9Q9C026 710 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 CWH43Q9H720 699 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 KBTBD4Q9NVX7 518 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 DACH1Q9UI36 760 aa11.71□□□□□ -0.53
NPHP3-203ENST00000465756 ARID2Q68CP9 1835 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 MYMKA6NI61 221 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 PHACTR2O75167 634 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 XYLBO75191 536 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 GLUD1P00367 558 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 KCNE1P15382 129 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 PFKFB1P16118 471 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 GATMP50440 423 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 MYO1EQ12965 1108 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 SMAD4Q13485 552 aaKnown RBP11.71□□□□□ -0.54
NPHP3-203ENST00000465756 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.54
NPHP3-203ENST00000465756 ALG13Q9NP73 1137 aaKnown RBP11.71□□□□□ -0.54
NPHP3-203ENST00000465756 KLK14Q9P0G3 267 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 PRKAG3Q9UGI9 489 aa11.71□□□□□ -0.54
NPHP3-203ENST00000465756 TMEM189-UBE2V1I3L0A0 370 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 NRP1O14786 923 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 B3GAT3O94766 335 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 AKAP5P24588 427 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 OSTNP61366 133 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 ITIH3Q06033 890 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 SV2CQ496J9 727 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 ATAT1Q5SQI0 421 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 EEF1DP3Q658K8 133 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 TIGD1Q96MW7 591 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 TTPALQ9BTX7 342 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 NR2E1Q9Y466 385 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 FAM160A1Q05DH4 1040 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 PLEKHA4Q9H4M7 779 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 C2CD2Q9Y426 696 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 EXTL3O43909 919 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 NRIP1P48552 1158 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 MYBPC2Q14324 1141 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 LEXMQ3ZCV2 418 aa11.7□□□□□ -0.54
NPHP3-203ENST00000465756 ODC1P11926 461 aa11.69□□□□□ -0.54
NPHP3-203ENST00000465756 SSTR3P32745 418 aaPredicted RBP11.69□□□□□ -0.54
NPHP3-203ENST00000465756 TRPC3Q13507 836 aa11.69□□□□□ -0.54
NPHP3-203ENST00000465756 DUSP6Q16828 381 aa11.69□□□□□ -0.54
NPHP3-203ENST00000465756 RIN2Q8WYP3 895 aaPredicted RBP11.69□□□□□ -0.54
NPHP3-203ENST00000465756 ACSF2Q96CM8 615 aaPredicted RBP11.69□□□□□ -0.54
NPHP3-203ENST00000465756 SNX27Q96L92 541 aa11.69□□□□□ -0.54
NPHP3-203ENST00000465756 SFXN1Q9H9B4 322 aa11.69□□□□□ -0.54
NPHP3-203ENST00000465756 RFXAPO00287 272 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms