RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CNTN3Q9P232 1028 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 LZTS1Q9Y250 596 aa22.19■■□□□ 1.14
SKA3-205ENST00000465471 REV3LO60673 3130 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 ANK1P16157 1881 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 RHOBTB3O94955 611 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 ADRB2P07550 413 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 CLTAP09496 248 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 DNAJB1P25685 340 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 MATR3P43243 847 aaKnown RBP eCLIP22.18■■□□□ 1.14
SKA3-205ENST00000465471 ALDH7A1P49419 539 aaKnown RBP22.18■■□□□ 1.14
SKA3-205ENST00000465471 KCNB1Q14721 858 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 SLC10A6Q3KNW5 377 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 SEZ6Q53EL9 994 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 ZBTB41Q5SVQ8 909 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 BCL7CQ8WUZ0 217 aaPredicted RBP22.18■■□□□ 1.14
SKA3-205ENST00000465471 FAM193BQ96PV7 902 aaPredicted RBP22.18■■□□□ 1.14
SKA3-205ENST00000465471 SLC39A2Q9NP94 309 aa22.18■■□□□ 1.14
SKA3-205ENST00000465471 CPSF3Q9UKF6 684 aaKnown RBP22.18■■□□□ 1.14
SKA3-205ENST00000465471 TTC26A0AVF1 554 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 THP07101 528 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 KCNE1P15382 129 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 GARTP22102 1010 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 IGFBP4P22692 258 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 TNFSF9P41273 254 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 TUSC3Q13454 348 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 PTPROQ16827 1216 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 SPATA20Q8TB22 786 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 IGSF21Q96ID5 467 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 ZMAT2Q96NC0 199 aaKnown RBP22.17■■□□□ 1.14
SKA3-205ENST00000465471 PLEKHA5Q9HAU0 1116 aa22.17■■□□□ 1.14
SKA3-205ENST00000465471 AGO2Q9UKV8 859 aaKnown RBP22.17■■□□□ 1.14
SKA3-205ENST00000465471 SMIM28A0A1B0GU29 152 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 NT5C1B-RDH14C9J2C7 533 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 NRP1O14786 923 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 TGFB1I1O43294 461 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 SLC34A2O95436 690 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 CXCL8P10145 99 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 POU5F1Q01860 360 aaKnown RBP22.16■■□□□ 1.14
SKA3-205ENST00000465471 PNOCQ13519 176 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 ENOX2Q16206 610 aaKnown RBP22.16■■□□□ 1.14
SKA3-205ENST00000465471 SYCP3Q8IZU3 236 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 POF1BQ8WVV4 589 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 POMGNT1Q8WZA1 660 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 MARCH5Q9NX47 278 aa22.16■■□□□ 1.14
SKA3-205ENST00000465471 PRPF40AO75400 957 aaKnown RBP22.15■■□□□ 1.14
SKA3-205ENST00000465471 EFEMP2O95967 443 aa22.15■■□□□ 1.14
SKA3-205ENST00000465471 ALDH2P05091 517 aa22.15■■□□□ 1.14
SKA3-205ENST00000465471 GLRA4Q5JXX5 417 aa22.15■■□□□ 1.14
SKA3-205ENST00000465471 CRELD2Q6UXH1 353 aaPredicted RBP22.15■■□□□ 1.14
SKA3-205ENST00000465471 CBWD1Q9BRT8 395 aa22.15■■□□□ 1.14
SKA3-205ENST00000465471 FAN1Q9Y2M0 1017 aa22.15■■□□□ 1.14
SKA3-205ENST00000465471 MYO7AQ13402 2215 aa22.14■■□□□ 1.14
SKA3-205ENST00000465471 FSCN2O14926 492 aa22.14■■□□□ 1.13
SKA3-205ENST00000465471 KINO60870 393 aaKnown RBP22.14■■□□□ 1.13
SKA3-205ENST00000465471 SNRPFP62306 86 aaKnown RBP22.14■■□□□ 1.13
SKA3-205ENST00000465471 MAFAQ8NHW3 353 aaPredicted RBP22.14■■□□□ 1.13
SKA3-205ENST00000465471 TMEM169Q96HH4 297 aa22.14■■□□□ 1.13
SKA3-205ENST00000465471 VN1R3Q9BXE9 311 aa22.14■■□□□ 1.13
SKA3-205ENST00000465471 AGPAT3Q9NRZ7 376 aa22.14■■□□□ 1.13
SKA3-205ENST00000465471 KIAA0391O15091 583 aaKnown RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 OR1G1P47890 313 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 ACOT2P49753 483 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 KRT17Q04695 432 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 SOX4Q06945 474 aaPredicted RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 KNOP1Q1ED39 458 aaKnown RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 TIGD5Q53EQ6 642 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 DDX53Q86TM3 631 aaKnown RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 NELFCDQ8IXH7 590 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 RNF168Q8IYW5 571 aaPredicted RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 ZSWIM2Q8NEG5 633 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 CCDC47Q96A33 483 aaKnown RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 GSDMAQ96QA5 445 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 PAAF1Q9BRP4 392 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 RPF1Q9H9Y2 349 aaKnown RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 TLR9Q9NR96 1032 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 SLC38A7Q9NVC3 462 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 CACNG4Q9UBN1 327 aa22.13■■□□□ 1.13
SKA3-205ENST00000465471 PRG3Q9Y2Y8 225 aaPredicted RBP22.13■■□□□ 1.13
SKA3-205ENST00000465471 CASTOR2A6NHX0 329 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 LACTBL1A8MY62 500 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 F8W810 466 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 IRS1P35568 1242 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 PPP2R3AQ06190 1150 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 ZBTB6Q15916 424 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 ARMCX5Q6P1M9 558 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 CD302Q8IX05 232 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 C12orf56Q8IXR9 622 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 GBP4Q96PP9 640 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 TSPAN18Q96SJ8 248 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 KCTD10Q9H3F6 313 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 LMBRD1Q9NUN5 540 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 CGNQ9P2M7 1197 aaKnown RBP22.12■■□□□ 1.13
SKA3-205ENST00000465471 PUF60Q9UHX1 559 aaKnown RBP22.12■■□□□ 1.13
SKA3-205ENST00000465471 HOOK1Q9UJC3 728 aaKnown RBP22.12■■□□□ 1.13
SKA3-205ENST00000465471 PCDHA5Q9Y5H7 936 aa22.12■■□□□ 1.13
SKA3-205ENST00000465471 LDHAP00338 332 aaKnown RBP22.11■■□□□ 1.13
SKA3-205ENST00000465471 ERVFC1P60507 584 aa22.11■■□□□ 1.13
SKA3-205ENST00000465471 HSP90AA2PQ14568 343 aaPredicted RBP22.11■■□□□ 1.13
SKA3-205ENST00000465471 PDE12Q6L8Q7 609 aaKnown RBP22.11■■□□□ 1.13
SKA3-205ENST00000465471 TMEM174Q8WUU8 243 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms