RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 MIOSQ9NXC5 875 aa18.46■□□□□ 0.55
USP39-211ENST00000465282 CNTN3Q9P232 1028 aa18.46■□□□□ 0.55
USP39-211ENST00000465282 KIAA1468Q9P260 1216 aa18.46■□□□□ 0.55
USP39-211ENST00000465282 STK39Q9UEW8 545 aa18.46■□□□□ 0.55
USP39-211ENST00000465282 TTC26A0AVF1 554 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 TISP43B9A030 160 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 H3BNC9 293 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 EXTL3O43909 919 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 PTMSP20962 102 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 MCM4P33991 863 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 AFF1P51825 1210 aaKnown RBP18.45■□□□□ 0.54
USP39-211ENST00000465282 BCAR1P56945 870 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 PPP2R3AQ06190 1150 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 NUP62CLQ9H1M0 184 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 IKZF4Q9H2S9 585 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 KCTD10Q9H3F6 313 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 ASB7Q9H672 318 aa18.45■□□□□ 0.54
USP39-211ENST00000465282 SMIM28A0A1B0GU29 152 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 PTGESO14684 152 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 XPOTO43592 962 aaKnown RBP18.44■□□□□ 0.54
USP39-211ENST00000465282 CALUO43852 315 aaPredicted RBP18.44■□□□□ 0.54
USP39-211ENST00000465282 ZC3H11AO75152 810 aaKnown RBP eCLIP18.44■□□□□ 0.54
USP39-211ENST00000465282 DDHD2O94830 711 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 IL18RAPO95256 599 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 GALTP07902 379 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 ACOT2P49753 483 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 UBE3AQ05086 875 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 TUSC3Q13454 348 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 STIM1Q13586 685 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 GRIN2CQ14957 1233 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 ENOX2Q16206 610 aaKnown RBP18.44■□□□□ 0.54
USP39-211ENST00000465282 NFIL3Q16649 462 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 ZNF280BQ86YH2 543 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 SLC9A9Q8IVB4 645 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 COLGALT2Q8IYK4 626 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 GPD1LQ8N335 351 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 FBXL18Q96ME1 805 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 UROC1Q96N76 676 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 PPP1R10Q96QC0 940 aaKnown RBP18.44■□□□□ 0.54
USP39-211ENST00000465282 CBWD1Q9BRT8 395 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 LMAN2LQ9H0V9 348 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 SPG21Q9NZD8 308 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 LMCD1Q9NZU5 365 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 MAN1B1Q9UKM7 699 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 TRAF3IP3Q9Y228 551 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 DERAQ9Y315 318 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 CDH23Q9H251 3354 aa18.44■□□□□ 0.54
USP39-211ENST00000465282 CXCL8P10145 99 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 POU3F3P20264 500 aaPredicted RBP18.43■□□□□ 0.54
USP39-211ENST00000465282 TNFSF9P41273 254 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 PLCB3Q01970 1234 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 KRT17Q04695 432 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 GPM6BQ13491 265 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 MORC3Q14149 939 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 CAMK4Q16566 473 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 SEZ6Q53EL9 994 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 CRELD2Q6UXH1 353 aaPredicted RBP18.43■□□□□ 0.54
USP39-211ENST00000465282 NT5DC4Q86YG4 428 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 XXYLT1Q8NBI6 393 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 GPT2Q8TD30 523 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 ERCC4Q92889 916 aaPredicted RBP18.43■□□□□ 0.54
USP39-211ENST00000465282 FAM213AQ9BRX8 229 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 CERS4Q9HA82 394 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 MTMR10Q9NXD2 777 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 HSPBP1Q9NZL4 362 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 MTUS1Q9ULD2 1270 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 LZTS1Q9Y250 596 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 FAN1Q9Y2M0 1017 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 COL4A4P53420 1690 aaPredicted RBP18.43■□□□□ 0.54
USP39-211ENST00000465282 PLXNA4Q9HCM2 1894 aa18.43■□□□□ 0.54
USP39-211ENST00000465282 ZNF233A6NK53 670 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 RPL13P26373 211 aaKnown RBP18.42■□□□□ 0.54
USP39-211ENST00000465282 PRCPP42785 496 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 SURF1Q15526 300 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 NAB2Q15742 525 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 ZBTB41Q5SVQ8 909 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 SLC39A11Q8N1S5 342 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 KLHL23Q8NBE8 558 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 DDX27Q96GQ7 796 aaKnown RBP18.42■□□□□ 0.54
USP39-211ENST00000465282 TMEM169Q96HH4 297 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 GAS2L1Q99501 681 aaPredicted RBP18.42■□□□□ 0.54
USP39-211ENST00000465282 COLEC11Q9BWP8 271 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 PRDM12Q9H4Q4 367 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 PCIF1Q9H4Z3 704 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 HCSTQ9UBK5 93 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 DNAJB4Q9UDY4 337 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 PUF60Q9UHX1 559 aaKnown RBP18.42■□□□□ 0.54
USP39-211ENST00000465282 PLAGL2Q9UPG8 496 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 C2CD2Q9Y426 696 aa18.42■□□□□ 0.54
USP39-211ENST00000465282 LACTBL1A8MY62 500 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 NRP1O14786 923 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 PSMA7O14818 248 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 FGF18O76093 207 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 CYP3A5P20815 502 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 RPL9P32969 192 aaKnown RBP18.41■□□□□ 0.54
USP39-211ENST00000465282 SLC11A1P49279 550 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 ZBTB6Q15916 424 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 PTPROQ16827 1216 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 EDRF1Q3B7T1 1238 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 CENPPQ6IPU0 288 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms