RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 KLHL23Q8NBE8 558 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 KIAA0895Q8NCT3 520 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 POMGNT1Q8WZA1 660 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 DDX27Q96GQ7 796 aaKnown RBP14.94□□□□□ -0.02
LIMD1-203ENST00000465039 TMEM169Q96HH4 297 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 PPP1R10Q96QC0 940 aaKnown RBP14.94□□□□□ -0.02
LIMD1-203ENST00000465039 ASB7Q9H672 318 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 MTUS1Q9ULD2 1270 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 GDAQ9Y2T3 454 aa14.94□□□□□ -0.02
LIMD1-203ENST00000465039 PDCD11Q14690 1871 aaKnown RBP14.93□□□□□ -0.02
LIMD1-203ENST00000465039 SMIM28A0A1B0GU29 152 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 EPOPA6NHQ4 379 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 ANKRD63C9JTQ0 380 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 GADD45BO75293 160 aaPredicted RBP14.93□□□□□ -0.02
LIMD1-203ENST00000465039 PRPF40AO75400 957 aaKnown RBP14.93□□□□□ -0.02
LIMD1-203ENST00000465039 IL18RAPO95256 599 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 POMCP01189 267 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 ALDH2P05091 517 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 ITGB1P05556 798 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 GALTP07902 379 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 CYP3A5P20815 502 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 PAX3P23760 479 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 CASP1P29466 404 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 HOXD13P35453 343 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 PPP2R3AQ06190 1150 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 KCNA1Q09470 495 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 STK4Q13043 487 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
LIMD1-203ENST00000465039 NAB2Q15742 525 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 SMARCE1Q969G3 411 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 PPP2R3CQ969Q6 453 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 IGSF21Q96ID5 467 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 ZBTB45Q96K62 511 aaPredicted RBP14.93□□□□□ -0.02
LIMD1-203ENST00000465039 FGFBP2Q9BYJ0 223 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 HAPLN2Q9GZV7 340 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 RPF1Q9H9Y2 349 aaKnown RBP14.93□□□□□ -0.02
LIMD1-203ENST00000465039 C2CD2Q9Y426 696 aa14.93□□□□□ -0.02
LIMD1-203ENST00000465039 PRRC2BQ5JSZ5 2229 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 RBAK-RBAKDNI3L0D1 243 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 PDXKO00764 312 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 EXTL3O43909 919 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 DDHD2O94830 711 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 PRPF6O94906 941 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 PRR29P0C7W0 189 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 RPL9P32969 192 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 AFF1P51825 1210 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 ELAVL2Q12926 359 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 ADGRE1Q14246 886 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 ENOX2Q16206 610 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 NFIL3Q16649 462 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 SLC10A6Q3KNW5 377 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 ARMCX5Q6P1M9 558 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 FOXR2Q6PJQ5 311 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 SPRED2Q7Z698 418 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 DDX53Q86TM3 631 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 ZNF280BQ86YH2 543 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 SLC9A9Q8IVB4 645 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 TRIML1Q8N9V2 468 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 SPPL3Q8TCT6 385 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 GDPD5Q8WTR4 605 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 HPS3Q969F9 1004 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 FBXL18Q96ME1 805 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 FAM161BQ96MY7 647 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 COLEC11Q9BWP8 271 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 SLC39A2Q9NP94 309 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 NGRNQ9NPE2 291 aaKnown RBP14.92□□□□□ -0.02
LIMD1-203ENST00000465039 AGPAT3Q9NRZ7 376 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 FAN1Q9Y2M0 1017 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 MTCH2Q9Y6C9 303 aa14.92□□□□□ -0.02
LIMD1-203ENST00000465039 TGFB1I1O43294 461 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 NCK2O43639 380 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 EFEMP2O95967 443 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 CXCL8P10145 99 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 HARSP12081 509 aaKnown RBP14.91□□□□□ -0.02
LIMD1-203ENST00000465039 SLC11A1P49279 550 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 PNOCQ13519 176 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 SURF1Q15526 300 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 ZNF658Q5TYW1 1059 aaPredicted RBP14.91□□□□□ -0.02
LIMD1-203ENST00000465039 BRSK2Q8IWQ3 736 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 GPD1LQ8N335 351 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 GLIS3Q8NEA6 775 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 MYLIPQ8WY64 445 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 CERS4Q9HA82 394 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 TLR9Q9NR96 1032 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 KLK14Q9P0G3 267 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 HCSTQ9UBK5 93 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 DNAJB4Q9UDY4 337 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 UBQLN1Q9UMX0 589 aaKnown RBP14.91□□□□□ -0.02
LIMD1-203ENST00000465039 TRAF3IP3Q9Y228 551 aa14.91□□□□□ -0.02
LIMD1-203ENST00000465039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-203ENST00000465039 NRP1O14786 923 aa14.9□□□□□ -0.02
LIMD1-203ENST00000465039 GRM6O15303 877 aa14.9□□□□□ -0.02
LIMD1-203ENST00000465039 B4GALT3O60512 393 aa14.9□□□□□ -0.02
LIMD1-203ENST00000465039 OSTNP61366 133 aa14.9□□□□□ -0.02
LIMD1-203ENST00000465039 ENPEPQ07075 957 aa14.9□□□□□ -0.02
LIMD1-203ENST00000465039 ZBTB6Q15916 424 aa14.9□□□□□ -0.02
LIMD1-203ENST00000465039 RNF168Q8IYW5 571 aaPredicted RBP14.9□□□□□ -0.02
LIMD1-203ENST00000465039 POF1BQ8WVV4 589 aa14.9□□□□□ -0.02
LIMD1-203ENST00000465039 CBWD1Q9BRT8 395 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms