RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 AGO2Q9UKV8 859 aaKnown RBP13.13□□□□□ -0.31
RPUSD3-211ENST00000464783 UBE4BO95155 1302 aa13.13□□□□□ -0.31
RPUSD3-211ENST00000464783 A0A0B4J269 797 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 TISP43B9A030 160 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 NRP1O14786 923 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 B4GALT3O60512 393 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 CXCL8P10145 99 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 DNAJB1P25685 340 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 TNFSF9P41273 254 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 PPP2R3AQ06190 1150 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 DSC1Q08554 894 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 PSMD2Q13200 908 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 TUSC3Q13454 348 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 BMS1Q14692 1282 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 POSTNQ15063 836 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 NELFCDQ8IXH7 590 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 TMEM87AQ8NBN3 555 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 PPP2R3CQ969Q6 453 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 IGSF21Q96ID5 467 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 TCF25Q9BQ70 676 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 COLEC11Q9BWP8 271 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 CXCL16Q9H2A7 254 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 NSUN3Q9H649 340 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 RPF1Q9H9Y2 349 aaKnown RBP13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 LZTS1Q9Y250 596 aa13.12□□□□□ -0.31
RPUSD3-211ENST00000464783 SMIM28A0A1B0GU29 152 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 KLRC4O43908 158 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 ACOT2P49753 483 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 EHHADHQ08426 723 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 DPYDQ12882 1025 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 ARMCX5Q6P1M9 558 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 TMC7Q7Z402 723 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 TMEM173Q86WV6 379 aaPredicted RBP13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 RABGGTAQ92696 567 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 SLC38A7Q9NVC3 462 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 CNTN3Q9P232 1028 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 STYXL1Q9Y6J8 313 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 EYSQ5T1H1 3165 aa13.11□□□□□ -0.31
RPUSD3-211ENST00000464783 PRPF40AO75400 957 aaKnown RBP13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 TADA2AO75478 443 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 SMC2O95347 1197 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 GARTP22102 1010 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 IRS1P35568 1242 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 ERVFC1P60507 584 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 UBE2HP62256 183 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 PNOCQ13519 176 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 CAMK1Q14012 370 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 HSP90AA2PQ14568 343 aaPredicted RBP13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 SLC10A6Q3KNW5 377 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 TCEAL5Q5H9L2 206 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 PDE12Q6L8Q7 609 aaKnown RBP13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 EPM2AIP1Q7L775 607 aaPredicted RBP13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 HS2ST1Q7LGA3 356 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 VPS52Q8N1B4 723 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 ENGASEQ8NFI3 743 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 BCL7CQ8WUZ0 217 aaPredicted RBP13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 PPP1R10Q96QC0 940 aaKnown RBP13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 FAM213AQ9BRX8 229 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 PCIF1Q9H4Z3 704 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 PLEKHA5Q9HAU0 1116 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 CACNG4Q9UBN1 327 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 STK39Q9UEW8 545 aa13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 CPSF3Q9UKF6 684 aaKnown RBP13.1□□□□□ -0.31
RPUSD3-211ENST00000464783 COL6A3P12111 3177 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 XPOTO43592 962 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 FAM189A1O60320 539 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 KIF20AO95235 890 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 KCNE1P15382 129 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 ADSSP30520 456 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 SPAG1Q07617 926 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 STK4Q13043 487 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 SMC1AQ14683 1233 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 XKR4Q5GH76 650 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 EP400NLQ6ZTU2 488 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 DDX53Q86TM3 631 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 CD302Q8IX05 232 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 KIAA0895Q8NCT3 520 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 UROC1Q96N76 676 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 PAAF1Q9BRP4 392 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 CBWD1Q9BRT8 395 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 IGFLR1Q9H665 355 aa13.09□□□□□ -0.31
RPUSD3-211ENST00000464783 GOLGA2P5Q9HBQ8 144 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms