RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.2■□□□□ 0.98
POLR2J3-203ENST00000464525 VIPAS39Q9H9C1 493 aa21.2■□□□□ 0.98
POLR2J3-203ENST00000464525 FAM153AQ9UHL3 310 aa21.2■□□□□ 0.98
POLR2J3-203ENST00000464525 NR2E1Q9Y466 385 aa21.2■□□□□ 0.98
POLR2J3-203ENST00000464525 LRRC37A2A6NM11 1700 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 PGRMC1O00264 195 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 DDX3YO15523 660 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 HARSP12081 509 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 ZNF211Q13398 564 aaPredicted RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 NAA35Q5VZE5 725 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 SPOPLQ6IQ16 392 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 ADAT2Q7Z6V5 191 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 CASKIN2Q8WXE0 1202 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 PSPC1Q8WXF1 523 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 GDF3Q9NR23 364 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 PDGFCQ9NRA1 345 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 MORF4L1Q9UBU8 362 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 ZHX1Q9UKY1 873 aaPredicted RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 AGPSO00116 658 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 KRT5P13647 590 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 CAPSQ13938 189 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 TARBP2Q15633 366 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 HSP90B2PQ58FF3 399 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 CPNE8Q86YQ8 564 aa21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 TSEN2Q8NCE0 465 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-203ENST00000464525 KRIT1O00522 736 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 NAMPTP43490 491 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 NEDD9Q14511 834 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 RGMBQ6NW40 437 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 AADACL2Q6P093 401 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 SEPT1Q8WYJ6 367 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 ZNF668Q96K58 619 aaPredicted RBP21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 BTBD6Q96KE9 485 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 MPHOSPH6Q99547 160 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 ALG6Q9Y672 507 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 IVNS1ABPQ9Y6Y0 642 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 ERICH4A6NGS2 130 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 RTN2O75298 545 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 TNNC1P63316 161 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 GPC5P78333 572 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 TDRD10Q5VZ19 366 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 METTL7BQ6UX53 244 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 C15orf39Q6ZRI6 1047 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 IFT20Q8IY31 132 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 PRPF31Q8WWY3 499 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 ALG3Q92685 438 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 GLG1Q92896 1179 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 COPS5Q92905 334 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 VTI1AQ96AJ9 217 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 ZBTB10Q96DT7 871 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 FNBP1Q96RU3 617 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 NRBP2Q9NSY0 501 aa21.18■□□□□ 0.98
POLR2J3-203ENST00000464525 PLXNB2O15031 1838 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 H0YCG3 227 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 FGGP02679 453 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 GTF2H1P32780 548 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 GRM1Q13255 1194 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 GPR142Q7Z601 462 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 USP37Q86T82 979 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 SART1O43290 800 aaKnown RBP21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 MARCKSL1P49006 195 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 AARSP49588 968 aaKnown RBP eCLIP21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 GUCY2FP51841 1108 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 EPHB4P54760 987 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 ARMCX2Q7L311 632 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 RASGEF1CQ8N431 466 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 LRRC71Q8N4P6 559 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 DDX1Q92499 740 aaKnown RBP21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 MSTO1Q9BUK6 570 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 ACBD3Q9H3P7 528 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 STYXL1Q9Y6J8 313 aa21.17■□□□□ 0.98
POLR2J3-203ENST00000464525 BIRC3Q13489 604 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 MESDQ14696 234 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 DDX42Q86XP3 938 aaKnown RBP eCLIP21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 RUBCNQ92622 972 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 KRT35Q92764 455 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 GPBP1L1Q9HC44 474 aaPredicted RBP21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 RBAKQ9NYW8 714 aaPredicted RBP21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 AMACRQ9UHK6 382 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 VNN1O95497 513 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 HLA-DRAP01903 254 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 SRGAP2CP0DJJ0 459 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 PDE6CP51160 858 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 CDR2Q01850 454 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 PSMD6Q15008 389 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 ZNF792Q3KQV3 632 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 RHOT2Q8IXI1 618 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 FAM71BQ8TC56 605 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 TRAPPC12Q8WVT3 735 aa21.16■□□□□ 0.98
POLR2J3-203ENST00000464525 RNF40O75150 1001 aa21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 C4BPAP04003 597 aaKnown RBP21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 TGFB3P10600 412 aa21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 MKRN4PQ13434 485 aaPredicted RBP21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 FAM110CQ1W6H9 321 aa21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 ZACNQ401N2 412 aa21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 FAM160B1Q5W0V3 765 aa21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 GPR20Q99678 358 aa21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 AZI2Q9H6S1 392 aa21.15■□□□□ 0.98
POLR2J3-203ENST00000464525 PASKQ96RG2 1323 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms