RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PCGF6Q9BYE7 350 aa5.35□□□□□ -1.55
CLK1-208ENST00000464454 TBKBP1A7MCY6 615 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 SGTAO43765 313 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 DTNBO60941 627 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 GPR32O75388 356 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 ZRANB2O95218 330 aaKnown RBP eCLIP5.34□□□□□ -1.55
CLK1-208ENST00000464454 ALOX15P16050 662 aaPredicted RBP5.34□□□□□ -1.55
CLK1-208ENST00000464454 HK1P19367 917 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 GUCY1A2P33402 732 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 RRP1BQ14684 758 aaKnown RBP5.34□□□□□ -1.55
CLK1-208ENST00000464454 SEPT2Q15019 361 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 VPS72Q15906 364 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 GFOD2Q3B7J2 385 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 UAP1L1Q3KQV9 507 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 NRN1LQ496H8 165 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 RRP12Q5JTH9 1297 aaKnown RBP5.34□□□□□ -1.55
CLK1-208ENST00000464454 RNF207Q6ZRF8 634 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 Q6ZRM9 215 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 GPRIN1Q7Z2K8 1008 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 TMPRSS6Q8IU80 811 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 C1orf210Q8IVY1 113 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 RHOT1Q8IXI2 618 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 REPS2Q8NFH8 660 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 ZFP28Q8NHY6 868 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 COA7Q96BR5 231 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 CEP95Q96GE4 821 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 AIFM3Q96NN9 605 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 LSM14BQ9BX40 385 aaKnown RBP5.34□□□□□ -1.55
CLK1-208ENST00000464454 PARPBPQ9NWS1 579 aa5.34□□□□□ -1.55
CLK1-208ENST00000464454 KLRG2A4D1S0 409 aaPredicted RBP5.33□□□□□ -1.56
CLK1-208ENST00000464454 PRPF3O43395 683 aaKnown RBP5.33□□□□□ -1.56
CLK1-208ENST00000464454 RECQL4O94761 1208 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 RAP2AP10114 183 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 SLC6A9P48067 706 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 SCNN1GP51170 649 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 CLRN1P58418 232 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 CDC42EP1Q00587 391 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 BMT2Q1RMZ1 405 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 ZXDCQ2QGD7 858 aaPredicted RBP5.33□□□□□ -1.56
CLK1-208ENST00000464454 MINDY4Q4G0A6 757 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 MFSD14BQ5SR56 506 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 EFCAB12Q6NXP0 572 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 XYLT1Q86Y38 959 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 DRC7Q8IY82 874 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 OR2I1PQ8NGU4 316 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 CCHCR1Q8TD31 782 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 TFAP2CQ92754 450 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 DPF2Q92785 391 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 CLIP3Q96DZ5 547 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 CPEB1Q9BZB8 566 aaKnown RBP5.33□□□□□ -1.56
CLK1-208ENST00000464454 ZNF703Q9H7S9 590 aaPredicted RBP5.33□□□□□ -1.56
CLK1-208ENST00000464454 SPON1Q9HCB6 807 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 TDP1Q9NUW8 608 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 AJAP1Q9UKB5 411 aaPredicted RBP5.33□□□□□ -1.56
CLK1-208ENST00000464454 SIK3Q9Y2K2 1263 aa5.33□□□□□ -1.56
CLK1-208ENST00000464454 CFAP20Q9Y6A4 193 aaKnown RBP5.33□□□□□ -1.56
CLK1-208ENST00000464454 XDHP47989 1333 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 CXorf49A8MYA2 514 aaPredicted RBP5.32□□□□□ -1.56
CLK1-208ENST00000464454 TRIM24O15164 1050 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 HTRA2O43464 458 aaPredicted RBP5.32□□□□□ -1.56
CLK1-208ENST00000464454 PRC1O43663 620 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 HSPA6P17066 643 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 ATP5JP18859 108 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 C1QL3Q5VWW1 255 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 AFMIDQ63HM1 303 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 OTUD7BQ6GQQ9 843 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 RSPH3Q86UC2 560 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 PGBD4Q96DM1 585 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 KCNH6Q9H252 994 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
CLK1-208ENST00000464454 IPPQ9Y573 584 aa5.32□□□□□ -1.56
CLK1-208ENST00000464454 ATRNL1Q5VV63 1379 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 MYBBP1AQ9BQG0 1328 aaKnown RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 CCDC154A6NI56 674 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 DIRC3C9JPN6 131 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 OFD1O75665 1012 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 POU2F2P09086 479 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 INSRRP14616 1297 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 DDCP20711 480 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 LPOP22079 712 aaPredicted RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 MTM1Q13496 603 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 HLTFQ14527 1009 aaKnown RBP eCLIP5.31□□□□□ -1.56
CLK1-208ENST00000464454 ATXN7L2Q5T6C5 722 aaPredicted RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 IFIT1BQ5T764 474 aaKnown RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 ANKS6Q68DC2 871 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 EPM2AIP1Q7L775 607 aaPredicted RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 FBXO18Q8NFZ0 1043 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 OR10H5Q8NGA6 315 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 IL17DQ8TAD2 202 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 EXTL1Q92935 676 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 FAM193BQ96PV7 902 aaPredicted RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 DCLRE1CQ96SD1 692 aaKnown RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 NDC1Q9BTX1 674 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 MRI1Q9BV20 369 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 LDAHQ9H6V9 325 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 NMRK2Q9NPI5 230 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 FAM30AQ9NZY2 134 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 POGKQ9P215 609 aa5.31□□□□□ -1.56
CLK1-208ENST00000464454 EIF2B4Q9UI10 523 aaKnown RBP5.31□□□□□ -1.56
CLK1-208ENST00000464454 LIMCH1Q9UPQ0 1083 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms