RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 GDPD5Q8WTR4 605 aa22.06■■□□□ 1.12
NUP43-205ENST00000463048 KCTD10Q9H3F6 313 aa22.06■■□□□ 1.12
NUP43-205ENST00000463048 PRDM12Q9H4Q4 367 aa22.06■■□□□ 1.12
NUP43-205ENST00000463048 KANSL3Q9P2N6 904 aa22.06■■□□□ 1.12
NUP43-205ENST00000463048 CPSF3Q9UKF6 684 aaKnown RBP22.06■■□□□ 1.12
NUP43-205ENST00000463048 TRIP11Q15643 1979 aa22.06■■□□□ 1.12
NUP43-205ENST00000463048 CASTOR2A6NHX0 329 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 THP07101 528 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 CD44P16070 742 aaKnown RBP22.05■■□□□ 1.12
NUP43-205ENST00000463048 BMPR1AP36894 532 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 OR1G1P47890 313 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 BCAR1P56945 870 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 PPP2R3AQ06190 1150 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 GRIK3Q13003 919 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 CRELD2Q6UXH1 353 aaPredicted RBP22.05■■□□□ 1.12
NUP43-205ENST00000463048 GPD1LQ8N335 351 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 DEFB123Q8N688 67 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 CLP1Q92989 425 aaKnown RBP22.05■■□□□ 1.12
NUP43-205ENST00000463048 ZMAT2Q96NC0 199 aaKnown RBP22.05■■□□□ 1.12
NUP43-205ENST00000463048 ZNF558Q96NG5 402 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 PRG3Q9Y2Y8 225 aaPredicted RBP22.05■■□□□ 1.12
NUP43-205ENST00000463048 CHD9Q3L8U1 2897 aa22.05■■□□□ 1.12
NUP43-205ENST00000463048 CITO14578 2027 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 SMIM28A0A1B0GU29 152 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 EXTL3O43909 919 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 LAG3P18627 525 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 SLC11A1P49279 550 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 KYAT1Q16773 422 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 KCNT2Q6UVM3 1135 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 CBWD2Q8IUF1 395 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 C18orf25Q96B23 403 aaPredicted RBP22.04■■□□□ 1.12
NUP43-205ENST00000463048 KIF12Q96FN5 646 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 GOLGA2P5Q9HBQ8 144 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 ALG13Q9NP73 1137 aaKnown RBP22.04■■□□□ 1.12
NUP43-205ENST00000463048 AAASQ9NRG9 546 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 PCDHB12Q9Y5F1 795 aa22.04■■□□□ 1.12
NUP43-205ENST00000463048 PDXKO00764 312 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 INPPL1O15357 1258 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 CALUO43852 315 aaPredicted RBP22.03■■□□□ 1.12
NUP43-205ENST00000463048 EXOC3O60645 756 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 NR3C1P04150 777 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 ALDH7A1P49419 539 aaKnown RBP22.03■■□□□ 1.12
NUP43-205ENST00000463048 WNT7BP56706 349 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 ALKAL1Q6UXT8 129 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 KLHL23Q8NBE8 558 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 EEF2KMTQ96G04 330 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 FAM84AQ96KN4 292 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 PAAF1Q9BRP4 392 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 RBAKQ9NYW8 714 aaPredicted RBP22.03■■□□□ 1.12
NUP43-205ENST00000463048 CNTN3Q9P232 1028 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 RALGAPA2Q2PPJ7 1873 aa22.03■■□□□ 1.12
NUP43-205ENST00000463048 TTC26A0AVF1 554 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 TRIM49BA6NDI0 452 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 F8W810 466 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 LDHAP00338 332 aaKnown RBP22.02■■□□□ 1.12
NUP43-205ENST00000463048 GALTP07902 379 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 GUCY2FP51841 1108 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 SOX4Q06945 474 aaPredicted RBP22.02■■□□□ 1.12
NUP43-205ENST00000463048 GPM6BQ13491 265 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 STIM1Q13586 685 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 JADE1Q6IE81 842 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 CAVIN1Q6NZI2 390 aaKnown RBP22.02■■□□□ 1.12
NUP43-205ENST00000463048 TMEM173Q86WV6 379 aaPredicted RBP22.02■■□□□ 1.12
NUP43-205ENST00000463048 COLGALT2Q8IYK4 626 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 ADSSL1Q8N142 457 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 XXYLT1Q8NBI6 393 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 GOLGA5Q8TBA6 731 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 SAMD11Q96NU1 681 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 PPP1R10Q96QC0 940 aaKnown RBP22.02■■□□□ 1.12
NUP43-205ENST00000463048 TUBGCP4Q9UGJ1 667 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 CTNND2Q9UQB3 1225 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 RWDD3Q9Y3V2 267 aa22.02■■□□□ 1.12
NUP43-205ENST00000463048 COL4A4P53420 1690 aaPredicted RBP22.01■■□□□ 1.11
NUP43-205ENST00000463048 TMEM265A0A087WTH1 108 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 PPP1R3GB7ZBB8 358 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 NRP1O14786 923 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 ADRB2P07550 413 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 NFICP08651 508 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 PMS1P54277 932 aaKnown RBP22.01■■□□□ 1.11
NUP43-205ENST00000463048 STX17P56962 302 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 TUSC3Q13454 348 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 CCDC183Q5T5S1 534 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 CEP135Q66GS9 1140 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 HASPINQ8TF76 798 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 TMEM63CQ9P1W3 806 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 CGNQ9P2M7 1197 aaKnown RBP22.01■■□□□ 1.11
NUP43-205ENST00000463048 FAN1Q9Y2M0 1017 aa22.01■■□□□ 1.11
NUP43-205ENST00000463048 ZNF233A6NK53 670 aa22■■□□□ 1.11
NUP43-205ENST00000463048 FGF18O76093 207 aa22■■□□□ 1.11
NUP43-205ENST00000463048 ALDH2P05091 517 aa22■■□□□ 1.11
NUP43-205ENST00000463048 ITGB1P05556 798 aa22■■□□□ 1.11
NUP43-205ENST00000463048 KCNE1P15382 129 aa22■■□□□ 1.11
NUP43-205ENST00000463048 NR2F2P24468 414 aa22■■□□□ 1.11
NUP43-205ENST00000463048 CASP4P49662 377 aa22■■□□□ 1.11
NUP43-205ENST00000463048 SNRPFP62306 86 aaKnown RBP22■■□□□ 1.11
NUP43-205ENST00000463048 DSC1Q08554 894 aa22■■□□□ 1.11
NUP43-205ENST00000463048 NAB2Q15742 525 aa22■■□□□ 1.11
NUP43-205ENST00000463048 SNRNP35Q16560 246 aaKnown RBP22■■□□□ 1.11
NUP43-205ENST00000463048 XKR4Q5GH76 650 aa22■■□□□ 1.11
NUP43-205ENST00000463048 LMBRD2Q68DH5 695 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms