RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 B4GALT5O43286 388 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 MARCH6O60337 910 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 XYLBO75191 536 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 DGAT1O75907 488 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 KIF4AO95239 1232 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 BAG4O95429 457 aaKnown RBP12.03□□□□□ -0.48
CBX3-205ENST00000462165 GLRA2P23416 452 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 CSTF1Q05048 431 aaKnown RBP12.03□□□□□ -0.48
CBX3-205ENST00000462165 UVSSAQ2YD98 709 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 FAM171A1Q5VUB5 890 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 PDXDC1Q6P996 788 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 RTL10Q7L3V2 364 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 TPH2Q8IWU9 490 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 ITFG1Q8TB96 612 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 HASPINQ8TF76 798 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 NELL1Q92832 810 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 CLDN23Q96B33 292 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 EIF2AK1Q9BQI3 630 aaKnown RBP12.03□□□□□ -0.48
CBX3-205ENST00000462165 ZSWIM6Q9HCJ5 1215 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 ANKEF1Q9NU02 776 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 ZSCAN32Q9NX65 697 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 CACNG4Q9UBN1 327 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 KCNH3Q9ULD8 1083 aa12.03□□□□□ -0.48
CBX3-205ENST00000462165 CASTOR2A6NHX0 329 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 LILRB5O75023 590 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 RPS9P46781 194 aaKnown RBP12.02□□□□□ -0.49
CBX3-205ENST00000462165 ELAVL2Q12926 359 aaKnown RBP12.02□□□□□ -0.49
CBX3-205ENST00000462165 ZBTB41Q5SVQ8 909 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 AXDND1Q5T1B0 1012 aaPredicted RBP12.02□□□□□ -0.49
CBX3-205ENST00000462165 PIK3AP1Q6ZUJ8 805 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 CENPQQ7L2Z9 268 aaPredicted RBP12.02□□□□□ -0.49
CBX3-205ENST00000462165 CEP57Q86XR8 500 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 NPAS3Q8IXF0 933 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 SLC7A14Q8TBB6 771 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 ATRIPQ8WXE1 791 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 PRIMPOLQ96LW4 560 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 CNTNAP3BQ96NU0 1288 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 NELL2Q99435 816 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 HSD17B14Q9BPX1 270 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 CNTNAP3Q9BZ76 1288 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 EPC1Q9H2F5 836 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 PRMT7Q9NVM4 692 aaPredicted RBP12.02□□□□□ -0.49
CBX3-205ENST00000462165 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
CBX3-205ENST00000462165 EPG5Q9HCE0 2579 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 PRR5-ARHGAP8B1AHC4 643 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 PTGESO14684 152 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 NCAM2O15394 837 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 ADAM12O43184 909 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 THP07101 528 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 XBP1P17861 261 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 CD72P21854 359 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 TARSP26639 723 aaKnown RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 RARRES1P49788 294 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 ATXN1P54253 815 aaKnown RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 ARHGAP8P85298 464 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 STK3Q13188 491 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 RAB33AQ14088 237 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 NAB2Q15742 525 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 FAM187BQ17R55 369 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 PABPC1LQ4VXU2 614 aaKnown RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 TPRG1Q6ZUI0 275 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 KXD1Q9BQD3 176 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 POLR3FQ9H1D9 316 aaPredicted RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 PRMT8Q9NR22 394 aaPredicted RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 HCFC1R1Q9NWW0 138 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 DNMT3BQ9UBC3 853 aaKnown RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 SMG5Q9UPR3 1016 aaKnown RBP12.01□□□□□ -0.49
CBX3-205ENST00000462165 CYP46A1Q9Y6A2 500 aa12.01□□□□□ -0.49
CBX3-205ENST00000462165 EPB41L2O43491 1005 aaKnown RBP12□□□□□ -0.49
CBX3-205ENST00000462165 TBC1D4O60343 1298 aa12□□□□□ -0.49
CBX3-205ENST00000462165 ECI2O75521 394 aa12□□□□□ -0.49
CBX3-205ENST00000462165 CDKL5O76039 1030 aa12□□□□□ -0.49
CBX3-205ENST00000462165 REC8O95072 547 aa12□□□□□ -0.49
CBX3-205ENST00000462165 LMNB2Q03252 620 aa12□□□□□ -0.49
CBX3-205ENST00000462165 FZD5Q13467 585 aa12□□□□□ -0.49
CBX3-205ENST00000462165 EARS2Q5JPH6 523 aaKnown RBP12□□□□□ -0.49
CBX3-205ENST00000462165 CDCA2Q69YH5 1023 aaPredicted RBP12□□□□□ -0.49
CBX3-205ENST00000462165 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
CBX3-205ENST00000462165 CCDC43Q96MW1 224 aaKnown RBP12□□□□□ -0.49
CBX3-205ENST00000462165 LARP6Q9BRS8 491 aaKnown RBP12□□□□□ -0.49
CBX3-205ENST00000462165 FAM126AQ9BYI3 521 aaPredicted RBP12□□□□□ -0.49
CBX3-205ENST00000462165 FZD8Q9H461 694 aa12□□□□□ -0.49
CBX3-205ENST00000462165 GJB4Q9NTQ9 266 aa12□□□□□ -0.49
CBX3-205ENST00000462165 SNTG2Q9NY99 539 aa12□□□□□ -0.49
CBX3-205ENST00000462165 GDE1Q9NZC3 331 aa12□□□□□ -0.49
CBX3-205ENST00000462165 MTRRQ9UBK8 725 aa12□□□□□ -0.49
CBX3-205ENST00000462165 PCDHA12Q9UN75 941 aa12□□□□□ -0.49
CBX3-205ENST00000462165 STK36Q9NRP7 1315 aa12□□□□□ -0.49
CBX3-205ENST00000462165 TPRP12270 2363 aaKnown RBP12□□□□□ -0.49
CBX3-205ENST00000462165 COL4A2P08572 1712 aa12□□□□□ -0.49
CBX3-205ENST00000462165 ZFHX4Q86UP3 3567 aa11.99□□□□□ -0.49
CBX3-205ENST00000462165 LRRIQ4A6NIV6 560 aa11.99□□□□□ -0.49
CBX3-205ENST00000462165 SHISA7A6NL88 538 aa11.99□□□□□ -0.49
CBX3-205ENST00000462165 TTLL13PA6NNM8 815 aa11.99□□□□□ -0.49
CBX3-205ENST00000462165 TMEM189-UBE2V1I3L0A0 370 aa11.99□□□□□ -0.49
CBX3-205ENST00000462165 N4BP3O15049 544 aa11.99□□□□□ -0.49
CBX3-205ENST00000462165 USO1O60763 962 aaKnown RBP11.99□□□□□ -0.49
CBX3-205ENST00000462165 KRT37O76014 449 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms