RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 RALGPS1Q5JS13 557 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 TMEM201Q5SNT2 666 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.34□□□□□ -1.39
SPTA1-202ENST00000461624 TMEM192Q8IY95 271 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 REXO1Q8N1G1 1221 aaKnown RBP6.34□□□□□ -1.39
SPTA1-202ENST00000461624 FAM13CQ8NE31 585 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 FBXO27Q8NI29 283 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 CAGE1Q8TC20 777 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 MORC4Q8TE76 937 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 CYB5D2Q8WUJ1 264 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 SUSD6Q92537 303 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 ACSF2Q96CM8 615 aaPredicted RBP6.34□□□□□ -1.39
SPTA1-202ENST00000461624 AP5M1Q9H0R1 490 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 BRMS1Q9HCU9 246 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 PIH1D3Q9NQM4 214 aaKnown RBP6.34□□□□□ -1.39
SPTA1-202ENST00000461624 CEP131Q9UPN4 1083 aa6.34□□□□□ -1.39
SPTA1-202ENST00000461624 BAZ2AQ9UIF9 1905 aaKnown RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 GRM6O15303 877 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 UQCRFS1P1P0C7P4 283 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 TMEM253P0C7T8 217 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 SRFP11831 508 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 IMPDH2P12268 514 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 TPP2P29144 1249 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 GNL2Q13823 731 aaKnown RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 TRIM71Q2Q1W2 868 aaKnown RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 DUSP28Q4G0W2 176 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 FAM83BQ5T0W9 1011 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 IQSEC1Q6DN90 963 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 NOL8Q76FK4 1167 aaKnown RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 LRRC8DQ7L1W4 858 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 CERS3Q8IU89 383 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 CREG2Q8IUH2 290 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 SLITRK4Q8IW52 837 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 FBXO16Q8IX29 292 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 KIAA2013Q8IYS2 634 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 MIGA1Q8NAN2 632 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 GPRASP2Q96D09 838 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 RIOK1Q9BRS2 568 aaKnown RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 MTG1Q9BT17 334 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 PHF7Q9BWX1 381 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 GPR62Q9BZJ7 368 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 DUSP15Q9H1R2 295 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 SH2D4AQ9H788 454 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 SLC38A10Q9HBR0 1119 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 DCP1AQ9NPI6 582 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 GPATCH2Q9NW75 528 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 REV1Q9UBZ9 1251 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 KCNH3Q9ULD8 1083 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 INPP5FQ9Y2H2 1132 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 POLR3KQ9Y2Y1 108 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 USP15Q9Y4E8 981 aaPredicted RBP6.33□□□□□ -1.4
SPTA1-202ENST00000461624 PCDHB14Q9Y5E9 798 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 CORINQ9Y5Q5 1042 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 KIAA1671Q9BY89 1806 aa6.33□□□□□ -1.4
SPTA1-202ENST00000461624 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 PTPRCP08575 1304 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 ASB14A6NK59 587 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 MPHOSPH10O00566 681 aaKnown RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 ATE1O95260 518 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 PARNO95453 639 aaKnown RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 ZSCAN22P10073 491 aaPredicted RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 CYP2D6P10635 497 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 EEF2P13639 858 aaKnown RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 ATF7P17544 494 aaPredicted RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 GLDCP23378 1020 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 CHMP4BP1P59074 171 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 PAK2Q13177 524 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 CWF19L1Q69YN2 538 aaKnown RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 LCNL1Q6ZST4 164 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 WDR63Q8IWG1 891 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 LILRA2Q8N149 483 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 ANKRD35Q8N283 1001 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 CHST13Q8NET6 341 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 NUP88Q99567 741 aaPredicted RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 LMAN2LQ9H0V9 348 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 VTA1Q9NP79 307 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 A1CFQ9NQ94 594 aaKnown RBP6.32□□□□□ -1.4
SPTA1-202ENST00000461624 INCENPQ9NQS7 918 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 KLHL3Q9UH77 587 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 DUSP13Q9UII6 198 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 HECTD1Q9ULT8 2610 aa6.32□□□□□ -1.4
SPTA1-202ENST00000461624 MYH4Q9Y623 1939 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 LMNAP02545 664 aaKnown RBP6.31□□□□□ -1.4
SPTA1-202ENST00000461624 CKBP12277 381 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 CLCN5P51795 746 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 HK2P52789 917 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 OAZ1P54368 228 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 MTX1Q13505 466 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 FAM47CQ5HY64 1035 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 GK5Q6ZS86 529 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 TSPYL5Q86VY4 417 aaPredicted RBP6.31□□□□□ -1.4
SPTA1-202ENST00000461624 EFHBQ8N7U6 833 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 PRPF38AQ8NAV1 312 aaKnown RBP6.31□□□□□ -1.4
SPTA1-202ENST00000461624 DTWD2Q8NBA8 298 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 PDZD8Q8NEN9 1154 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 RNF141Q8WVD5 230 aa6.31□□□□□ -1.4
SPTA1-202ENST00000461624 TOP1MTQ969P6 601 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms