RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 SEPT1Q8WYJ6 367 aa7.83□□□□□ -1.16
NUP50-212ENST00000461194 RNPC3Q96LT9 517 aaKnown RBP7.83□□□□□ -1.16
NUP50-212ENST00000461194 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.83□□□□□ -1.16
NUP50-212ENST00000461194 AGO4Q9HCK5 861 aaKnown RBP7.83□□□□□ -1.16
NUP50-212ENST00000461194 IL23AQ9NPF7 189 aa7.83□□□□□ -1.16
NUP50-212ENST00000461194 ZNF215Q9UL58 517 aaPredicted RBP7.83□□□□□ -1.16
NUP50-212ENST00000461194 TELO2Q9Y4R8 837 aa7.83□□□□□ -1.16
NUP50-212ENST00000461194 LTBP2Q14767 1821 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 NFASCO94856 1347 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 STK36Q9NRP7 1315 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 KIAA1217Q5T5P2 1943 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 IGLV3-22A0A075B6J6 115 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 GSTTP1A0A1W2PQM5 241 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 PRAMEF27A3QJZ7 478 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 FAM86B1E9PN63 330 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 GFRA2O00451 464 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 GREM1O60565 184 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 CILPO75339 1184 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 CTDNEP1O95476 244 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 PFKMP08237 780 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 FAM86B2P0C5J1 330 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 IQCF3P0C7M6 154 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 ACRP10323 421 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 HOXC8P31273 242 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 CIITAP33076 1130 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 RFC2P35250 354 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 TCF7P36402 384 aaPredicted RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 SP4Q02446 784 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 RPL6Q02878 288 aaKnown RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 RBL2Q08999 1139 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 ITGB3BPQ13352 177 aaPredicted RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 UTP14CQ5TAP6 766 aaKnown RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 PSRC1Q6PGN9 363 aaPredicted RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 ZNF365Q70YC5 407 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 PLA2G4DQ86XP0 818 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 RPUSD2Q8IZ73 545 aaKnown RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 DAGLBQ8NCG7 672 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 RASGRP4Q8TDF6 673 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 DHX38Q92620 1227 aaKnown RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 GTF3C6Q969F1 213 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 VWCEQ96DN2 955 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 SCLYQ96I15 445 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 SDF4Q9BRK5 362 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 C22orf23Q9BZE7 217 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 GSX1Q9H4S2 264 aaPredicted RBP7.82□□□□□ -1.16
NUP50-212ENST00000461194 STOML1Q9UBI4 398 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 SLC9A2Q9UBY0 812 aa7.82□□□□□ -1.16
NUP50-212ENST00000461194 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 FAM95CA0A1B0GW59 222 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 C17orf102A2RUQ5 167 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 EDIL3O43854 480 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 PARNO95453 639 aaKnown RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 LARGE1O95461 756 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 FGBP02675 491 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 SMIM10L2AP0DMW4 78 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 SMIM10L2BP0DMW5 78 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 GNAT1P11488 350 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 XBP1P17861 261 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 ACTR2P61160 394 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 SMAD3P84022 425 aaKnown RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 ZNF200P98182 395 aaPredicted RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 SETQ01105 290 aaPredicted RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 NFKBIBQ15653 356 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 NPY5RQ15761 445 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 TRIM71Q2Q1W2 868 aaKnown RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 PRR23CQ6ZRP0 262 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 SERINC5Q86VE9 423 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 SMYD4Q8IYR2 804 aaPredicted RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 BLIDQ8IZY5 108 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 NECAB1Q8N987 351 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 RNF214Q8ND24 703 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 AFAP1L1Q8TED9 768 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 HERVK_113Q902F9 699 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 WASF1Q92558 559 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 AIFM3Q96NN9 605 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 KIF2CQ99661 725 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 PHF20Q9BVI0 1012 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 YIPF2Q9BWQ6 316 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 MTIF3Q9H2K0 278 aaKnown RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 RNPEPQ9H4A4 650 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 SMARCAD1Q9H4L7 1026 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 IGSF5Q9NSI5 407 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 ERAP1Q9NZ08 941 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 UBP1Q9NZI7 540 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 ORC3Q9UBD5 711 aaPredicted RBP7.81□□□□□ -1.16
NUP50-212ENST00000461194 RAXQ9Y2V3 346 aa7.81□□□□□ -1.16
NUP50-212ENST00000461194 EMSYQ7Z589 1322 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 NRCAMQ92823 1304 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 SZT2Q5T011 3432 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 IPO5O00410 1097 aaKnown RBP7.8□□□□□ -1.16
NUP50-212ENST00000461194 FURINP09958 794 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 CKBP12277 381 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 FDPSP14324 419 aaKnown RBP7.8□□□□□ -1.16
NUP50-212ENST00000461194 ETF1P62495 437 aaKnown RBP7.8□□□□□ -1.16
NUP50-212ENST00000461194 ADAM17P78536 824 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 RING1Q06587 406 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 RAD51AP2Q09MP3 1159 aa7.8□□□□□ -1.16
NUP50-212ENST00000461194 PRR16Q569H4 304 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms