RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PDCD11Q14690 1871 aaKnown RBP22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 XIRP2A4UGR9 3374 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 SMIM28A0A1B0GU29 152 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 THP07101 528 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 CLTAP09496 248 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 IRS1P35568 1242 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 YARSP54577 528 aaKnown RBP22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 CCDC85BQ15834 202 aaPredicted RBP22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 KMT5BQ4FZB7 885 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 SLFN12LQ6IEE8 588 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 KANK3Q6NY19 840 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 STXBP4Q6ZWJ1 553 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 SCFD1Q8WVM8 642 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 ZMAT2Q96NC0 199 aaKnown RBP22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 TMEM206Q9H813 350 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 MARCH5Q9NX47 278 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 CNTN3Q9P232 1028 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 FAN1Q9Y2M0 1017 aa22.5■■□□□ 1.19
RPUSD3-210ENST00000460909 NR1I2O75469 434 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 EFEMP2O95967 443 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 RPN1P04843 607 aaKnown RBP22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 ADRB2P07550 413 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 KCNE1P15382 129 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 ERVFC1P60507 584 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 KRT17Q04695 432 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 STK4Q13043 487 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 TUSC3Q13454 348 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 KYAT1Q16773 422 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 GLRA4Q5JXX5 417 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 MICALL1Q8N3F8 863 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 TMEM169Q96HH4 297 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 TIGD1Q96MW7 591 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 PAAF1Q9BRP4 392 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 VN1R3Q9BXE9 311 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 SLC39A2Q9NP94 309 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 CACNG4Q9UBN1 327 aa22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 CPSF3Q9UKF6 684 aaKnown RBP22.49■■□□□ 1.19
RPUSD3-210ENST00000460909 TTC26A0AVF1 554 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 F8W810 466 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 FSCN2O14926 492 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 CXCL8P10145 99 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 OR1G1P47890 313 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 PSMD2Q13200 908 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 POSTNQ15063 836 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 ENOX2Q16206 610 aaKnown RBP22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 BMT2Q1RMZ1 405 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 SYCP3Q8IZU3 236 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 KIAA0895Q8NCT3 520 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 PLEKHA5Q9HAU0 1116 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 TLR9Q9NR96 1032 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 EXOC1Q9NV70 894 aa22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 AGO2Q9UKV8 859 aaKnown RBP22.48■■□□□ 1.19
RPUSD3-210ENST00000460909 ANK1P16157 1881 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 TGFB1I1O43294 461 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 SOX4Q06945 474 aaPredicted RBP22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 TIGD5Q53EQ6 642 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 CRELD2Q6UXH1 353 aaPredicted RBP22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 DDX53Q86TM3 631 aaKnown RBP22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 ZSWIM2Q8NEG5 633 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 PPM1EQ8WY54 764 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 POMGNT1Q8WZA1 660 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 NSUN3Q9H649 340 aaKnown RBP22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 PUF60Q9UHX1 559 aaKnown RBP22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 PRG3Q9Y2Y8 225 aaPredicted RBP22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 PCDHGC5Q9Y5F6 944 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 UBE4BO95155 1302 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 UNC80Q8N2C7 3258 aa22.47■■□□□ 1.19
RPUSD3-210ENST00000460909 CASTOR2A6NHX0 329 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 RHOBTB3O94955 611 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 CSPG5O95196 566 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 GARTP22102 1010 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 ACOT2P49753 483 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 PNOCQ13519 176 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 RABGGTAQ92696 567 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 CBWD1Q9BRT8 395 aa22.46■■□□□ 1.19
RPUSD3-210ENST00000460909 SPTBN5Q9NRC6 3674 aaKnown RBP22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 LACTBL1A8MY62 500 aa22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 POU5F1Q01860 360 aaKnown RBP22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 HSP90AA2PQ14568 343 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 KCNB1Q14721 858 aa22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 ZBTB6Q15916 424 aa22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 TCEAL5Q5H9L2 206 aa22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 ELOA2Q8IYF1 753 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 RNF168Q8IYW5 571 aaPredicted RBP22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 COLEC11Q9BWP8 271 aa22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 RPF1Q9H9Y2 349 aaKnown RBP22.45■■□□□ 1.18
RPUSD3-210ENST00000460909 IGFBP6P24592 240 aaPredicted RBP22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 UBE2HP62256 183 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 PDE12Q6L8Q7 609 aaKnown RBP22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 ADGRD2Q7Z7M1 963 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 NELFCDQ8IXH7 590 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 VPS52Q8N1B4 723 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 SPATA20Q8TB22 786 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 C18orf25Q96B23 403 aaPredicted RBP22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 CCDC34Q96HJ3 373 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 TCF25Q9BQ70 676 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 ZBP1Q9H171 429 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 GOLGA2P5Q9HBQ8 144 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 SLC38A7Q9NVC3 462 aa22.44■■□□□ 1.18
RPUSD3-210ENST00000460909 PRPF40AO75400 957 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms