RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 GAD1Q99259 594 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 MKNK1Q9BUB5 465 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 CBX8Q9HC52 389 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 UBN1Q9NPG3 1134 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 INPP5FQ9Y2H2 1132 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 GIT1Q9Y2X7 761 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 NFE2L3Q9Y4A8 694 aa11.06□□□□□ -0.64
UPF2-204ENST00000460569 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 TTC26A0AVF1 554 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 SMTNL1A8MU46 457 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 LACTBL1A8MY62 500 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 IKBKBO14920 756 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 MAPK13O15264 365 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 IL18RAPO95256 599 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 KRT13P13646 458 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 ATP2A2P16615 1042 aaKnown RBP11.05□□□□□ -0.64
UPF2-204ENST00000460569 GATMP50440 423 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 SCNN1GP51170 649 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 WNT7BP56706 349 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 SLC10A6Q3KNW5 377 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 HSP90AA4PQ58FG1 418 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 GLRA4Q5JXX5 417 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 CLLU1OSQ5K130 101 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 FILIP1Q7Z7B0 1213 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 CREBRFQ8IUR6 639 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 FAM114A1Q8IWE2 563 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 DHX40Q8IX18 779 aaKnown RBP11.05□□□□□ -0.64
UPF2-204ENST00000460569 URGCPQ8TCY9 931 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 TOP1MTQ969P6 601 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 CCDC127Q96BQ5 260 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 CNOT6LQ96LI5 555 aaKnown RBP11.05□□□□□ -0.64
UPF2-204ENST00000460569 ZFP42Q96MM3 310 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 THAP9Q9H5L6 903 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 PLEKHA5Q9HAU0 1116 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 RNF19AQ9NV58 838 aa11.05□□□□□ -0.64
UPF2-204ENST00000460569 MAGEC2Q9UBF1 373 aaPredicted RBP11.05□□□□□ -0.64
UPF2-204ENST00000460569 TNRC18O15417 2968 aaPredicted RBP11.05□□□□□ -0.64
UPF2-204ENST00000460569 ARL5CA6NH57 179 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 TBKBP1A7MCY6 615 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 MEFVO15553 781 aaPredicted RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 OFD1O75665 1012 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 GNA14O95837 355 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 DLATP10515 647 aaKnown RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 POU5F1Q01860 360 aaKnown RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 SPAG1Q07617 926 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 BFSP1Q12934 665 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 TMEM132DQ14C87 1099 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 NCAPHQ15003 741 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 PSMD6Q15008 389 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 IQCB1Q15051 598 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 PAN2Q504Q3 1202 aaKnown RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 DCAF17Q5H9S7 520 aaPredicted RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 NOMO2Q5JPE7 1267 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 RASIP1Q5U651 963 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 TCERG1LQ5VWI1 586 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 JADE1Q6IE81 842 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 INTS8Q75QN2 995 aaKnown RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 LUZP1Q86V48 1076 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 CD302Q8IX05 232 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 CRIPAKQ8N1N5 446 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 RNF214Q8ND24 703 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 MFSD14AQ96MC6 490 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 FNBP1Q96RU3 617 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 YME1L1Q96TA2 773 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 TMEM117Q9H0C3 514 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 CXCL16Q9H2A7 254 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 METTL14Q9HCE5 456 aaKnown RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 SAMSN1Q9NSI8 373 aaKnown RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 FANCLQ9NW38 375 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 CNTN3Q9P232 1028 aa11.04□□□□□ -0.64
UPF2-204ENST00000460569 ARMCX3Q9UH62 379 aaPredicted RBP11.04□□□□□ -0.64
UPF2-204ENST00000460569 KCNJ18B7U540 433 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 GOLGA6L19H0YKK7 550 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 PTGESO14684 152 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 DGKIO75912 1065 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 GJB5O95377 273 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 POMCP01189 267 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 NFICP08651 508 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 TRIM49P0CI25 452 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 TRIM49CP0CI26 452 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 TNNI1P19237 187 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 BMP8BP34820 402 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 MTIF2P46199 727 aaKnown RBP11.03□□□□□ -0.64
UPF2-204ENST00000460569 VAMP7P51809 220 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 AFF1P51825 1210 aaKnown RBP11.03□□□□□ -0.64
UPF2-204ENST00000460569 TPM4P67936 248 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 TFAMQ00059 246 aaKnown RBP11.03□□□□□ -0.64
UPF2-204ENST00000460569 RNASELQ05823 741 aaKnown RBP11.03□□□□□ -0.64
UPF2-204ENST00000460569 GRIK3Q13003 919 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 KCNJ12Q14500 433 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 SURF1Q15526 300 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 CDKAL1Q5VV42 579 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 LMBRD2Q68DH5 695 aaPredicted RBP11.03□□□□□ -0.64
UPF2-204ENST00000460569 CHRDL2Q6WN34 429 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 FRMD5Q7Z6J6 570 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 USP37Q86T82 979 aa11.03□□□□□ -0.64
UPF2-204ENST00000460569 IRF2BP1Q8IU81 584 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms