RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 SLC4A10Q6U841 1118 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 B3GNT9Q6UX72 402 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 TTLL10Q6ZVT0 673 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 POLNQ7Z5Q5 900 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 FAM83AQ86UY5 434 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 GSPT2Q8IYD1 628 aaKnown RBP6.06□□□□□ -1.44
VBP1-202ENST00000460509 ZBTB34Q8NCN2 500 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 C3orf20Q8ND61 904 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 SLC35B2Q8TB61 432 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 C8orf48Q96LL4 319 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 C20orf173Q96LM9 149 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 MRI1Q9BV20 369 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 DEF6Q9H4E7 631 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 RTEL1Q9NZ71 1219 aa6.06□□□□□ -1.44
VBP1-202ENST00000460509 CXorf49A8MYA2 514 aaPredicted RBP6.05□□□□□ -1.44
VBP1-202ENST00000460509 PRR5-ARHGAP8B1AHC4 643 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 ERC2O15083 957 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 KIAA0391O15091 583 aaKnown RBP6.05□□□□□ -1.44
VBP1-202ENST00000460509 TEX33O43247 280 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 ZNF623O75123 536 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 ITGB3P05106 788 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 ALOX15P16050 662 aaPredicted RBP6.05□□□□□ -1.44
VBP1-202ENST00000460509 ATP5JP18859 108 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 COMTP21964 271 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 MAP2K6P52564 334 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 MTM1Q13496 603 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 RAB39AQ14964 217 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 ATP2B3Q16720 1220 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 ERICH6BQ5W0A0 696 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 DENND1CQ8IV53 801 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 CHST13Q8NET6 341 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 NSUN6Q8TEA1 469 aaKnown RBP6.05□□□□□ -1.44
VBP1-202ENST00000460509 ST8SIA2Q92186 375 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 PGBD4Q96DM1 585 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 PHACTR3Q96KR7 559 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 MPHOSPH9Q99550 1183 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 CGRRF1Q99675 332 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 MYOCQ99972 504 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 ARMT1Q9H993 441 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 MAN1C1Q9NR34 630 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 OBP2AQ9NY56 170 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 POGKQ9P215 609 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 DDX20Q9UHI6 824 aaKnown RBP6.05□□□□□ -1.44
VBP1-202ENST00000460509 ST6GALNAC2Q9UJ37 374 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 POLHQ9Y253 713 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 NR2E3Q9Y5X4 410 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 SLC30A1Q9Y6M5 507 aa6.05□□□□□ -1.44
VBP1-202ENST00000460509 FRMPD2Q68DX3 1309 aaPredicted RBP6.04□□□□□ -1.44
VBP1-202ENST00000460509 TCRBV7S2A1N4TA0A589 114 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 B5MCH6 92 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 H3BUI4 141 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 KIF3BO15066 747 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 IPO13O94829 963 aaKnown RBP6.04□□□□□ -1.44
VBP1-202ENST00000460509 SNRPA1P09661 255 aaKnown RBP6.04□□□□□ -1.44
VBP1-202ENST00000460509 CTXN1P60606 82 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 ICAM4Q14773 271 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 LLGL1Q15334 1064 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 HS1BP3Q53T59 392 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 ZNF529Q6P280 563 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 ZNF585AQ6P3V2 769 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 UBE3BQ7Z3V4 1068 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 RNF169Q8NCN4 708 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 IFI44Q8TCB0 444 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 Q8TCH9 128 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 ATXN2LQ8WWM7 1075 aaKnown RBP6.04□□□□□ -1.44
VBP1-202ENST00000460509 CASKIN2Q8WXE0 1202 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 TFAP2CQ92754 450 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 MRGPRX4Q96LA9 322 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 SSBP3Q9BWW4 388 aaPredicted RBP6.04□□□□□ -1.44
VBP1-202ENST00000460509 C1orf112Q9NSG2 853 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 HECAQ9UBI9 543 aaPredicted RBP6.04□□□□□ -1.44
VBP1-202ENST00000460509 ABCF2Q9UG63 623 aa6.04□□□□□ -1.44
VBP1-202ENST00000460509 TBKBP1A7MCY6 615 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 K7ESM1 405 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 SLC16A6O15403 523 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 UBXN7O94888 489 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 MALP21145 153 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 ACO1P21399 889 aaKnown RBP6.03□□□□□ -1.44
VBP1-202ENST00000460509 HIBADHP31937 336 aaKnown RBP6.03□□□□□ -1.44
VBP1-202ENST00000460509 CLRN1P58418 232 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 ATP8B2P98198 1209 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 NOGQ13253 232 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 SNAPC2Q13487 334 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 GRM3Q14832 879 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 CCDC181Q5TID7 509 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 EFCAB12Q6NXP0 572 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 HEATR3Q7Z4Q2 680 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 APBB1IPQ7Z5R6 666 aaPredicted RBP6.03□□□□□ -1.44
VBP1-202ENST00000460509 DAAM2Q86T65 1068 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 CCAR1Q8IX12 1150 aaKnown RBP6.03□□□□□ -1.44
VBP1-202ENST00000460509 ANKRD35Q8N283 1001 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 ZNF808Q8N4W9 903 aaPredicted RBP6.03□□□□□ -1.44
VBP1-202ENST00000460509 MIEF2Q96C03 454 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 RUNDC1Q96C34 613 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 FAM89AQ96GI7 184 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 DMRTA2Q96SC8 542 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 ADOQ96SZ5 270 aa6.03□□□□□ -1.44
VBP1-202ENST00000460509 RBM15Q96T37 977 aaKnown RBP eCLIP6.03□□□□□ -1.44
VBP1-202ENST00000460509 LSM14BQ9BX40 385 aaKnown RBP6.03□□□□□ -1.44
VBP1-202ENST00000460509 C11orf54Q9H0W9 315 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms