RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 HERC4Q5GLZ8 1057 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-213ENST00000460211 AXDND1Q5T1B0 1012 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-213ENST00000460211 SHC4Q6S5L8 630 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 ADGRD2Q7Z7M1 963 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 MRPL43Q8N983 215 aaKnown RBP16.35■□□□□ 0.21
ATG4B-213ENST00000460211 GSTCDQ8NEC7 633 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 DHX58Q96C10 678 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 SPATA32Q96LK8 384 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 TNMDQ9H2S6 317 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 SSX2IPQ9Y2D8 614 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 ZDHHC9Q9Y397 364 aa16.35■□□□□ 0.21
ATG4B-213ENST00000460211 A0A087X0B3 334 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 HNRNPDLO14979 420 aaKnown RBP16.34■□□□□ 0.21
ATG4B-213ENST00000460211 PER2O15055 1255 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 CTSAP10619 480 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 HARSP12081 509 aaKnown RBP16.34■□□□□ 0.21
ATG4B-213ENST00000460211 NMT1P30419 496 aaKnown RBP16.34■□□□□ 0.21
ATG4B-213ENST00000460211 OSTNP61366 133 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 NUCB2P80303 420 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 GTF2BQ00403 316 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 ADAM15Q13444 863 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 DUSP6Q16828 381 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 TMEM173Q86WV6 379 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-213ENST00000460211 CCDC65Q8IXS2 484 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 SCAND2PQ9GZW5 306 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-213ENST00000460211 ST6GALNAC4Q9H4F1 302 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 MRPL44Q9H9J2 332 aaKnown RBP16.34■□□□□ 0.21
ATG4B-213ENST00000460211 MAGEF1Q9HAY2 307 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 PCDHGC5Q9Y5F6 944 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 TECTAO75443 2155 aa16.34■□□□□ 0.21
ATG4B-213ENST00000460211 POLR2DO15514 142 aaKnown RBP16.33■□□□□ 0.2
ATG4B-213ENST00000460211 B4GALT3O60512 393 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 TADA2AO75478 443 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 MCL1Q07820 350 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 RESP18Q5W5W9 173 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 ZNF720Q7Z2F6 126 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 SFR1Q86XK3 245 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 EDAQ92838 391 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 HVCN1Q96D96 273 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 DNAJC19Q96DA6 116 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 ZBTB45Q96K62 511 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-213ENST00000460211 EMILIN2Q9BXX0 1053 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 ZBP1Q9H171 429 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 SLC38A7Q9NVC3 462 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 PANK4Q9NVE7 773 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 EXOC7Q9UPT5 735 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 PCDHB13Q9Y5F0 798 aa16.33■□□□□ 0.2
ATG4B-213ENST00000460211 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-213ENST00000460211 C2orf71A6NGG8 1288 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 PTGESO14684 152 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 PIGRP01833 764 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 SOD2P04179 222 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 ALCAMQ13740 583 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 HSP90AA2PQ14568 343 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-213ENST00000460211 E2F4Q16254 413 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 IER5LQ5T953 404 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 SLFN12LQ6IEE8 588 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 KIAA1841Q6NSI8 718 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 STXBP4Q6ZWJ1 553 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 CEP120Q8N960 986 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 PRSS33Q8NF86 280 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 BCL7CQ8WUZ0 217 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-213ENST00000460211 LEO1Q8WVC0 666 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-213ENST00000460211 MSLNLQ96KJ4 702 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 PLXNA4Q9HCM2 1894 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 MRPL17Q9NRX2 175 aaKnown RBP16.32■□□□□ 0.2
ATG4B-213ENST00000460211 KBTBD4Q9NVX7 518 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 CLEC1BQ9P126 229 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 KCNH3Q9ULD8 1083 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 BARX2Q9UMQ3 279 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-213ENST00000460211 IRAK3Q9Y616 596 aa16.32■□□□□ 0.2
ATG4B-213ENST00000460211 MYH11P35749 1972 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 TMEM221A6NGB7 291 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 CASTOR2A6NHX0 329 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 M0R296 226 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 ABLIM1O14639 778 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 URODP06132 367 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 CLTAP09496 248 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 CMA1P23946 247 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 ADALQ6DHV7 355 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 PPFIBP1Q86W92 1011 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 MAP4K3Q8IVH8 894 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 CEP57L1Q8IYX8 460 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 PBXIP1Q96AQ6 731 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 DDX27Q96GQ7 796 aaKnown RBP16.31■□□□□ 0.2
ATG4B-213ENST00000460211 UROC1Q96N76 676 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 FIZ1Q96SL8 496 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 PLEKHA5Q9HAU0 1116 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 OLFML3Q9NRN5 406 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 MARCH5Q9NX47 278 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 ADAM28Q9UKQ2 775 aa16.31■□□□□ 0.2
ATG4B-213ENST00000460211 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-213ENST00000460211 SMIM28A0A1B0GU29 152 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 FRMD3A2A2Y4 597 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 GCNT3O95395 438 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 ASIC1P78348 528 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 ELAVL2Q12926 359 aaKnown RBP16.3■□□□□ 0.2
ATG4B-213ENST00000460211 POSTNQ15063 836 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms