RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 SAAL1Q96ER3 474 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 GCNT4Q9P109 453 aa11.19□□□□□ -0.62
HERC4-207ENST00000460168 SUCLA2Q9P2R7 463 aaPredicted RBP11.19□□□□□ -0.62
HERC4-207ENST00000460168 GNEQ9Y223 722 aaKnown RBP11.19□□□□□ -0.62
HERC4-207ENST00000460168 PHLPP2Q6ZVD8 1323 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 C22orf31O95567 290 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 HOXD8P13378 290 aaPredicted RBP11.18□□□□□ -0.62
HERC4-207ENST00000460168 VAMP7P51809 220 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 EFNA5P52803 228 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 MKRN4PQ13434 485 aaPredicted RBP11.18□□□□□ -0.62
HERC4-207ENST00000460168 MTF1Q14872 753 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 TOGARAM2Q6ZUX3 1019 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 ZBTB8OSQ8IWT0 167 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
HERC4-207ENST00000460168 ZSWIM2Q8NEG5 633 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 ZBTB10Q96DT7 871 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 NLRP4Q96MN2 994 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 UBXN6Q9BZV1 441 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 MMADHCQ9H3L0 296 aaPredicted RBP11.18□□□□□ -0.62
HERC4-207ENST00000460168 NLRC4Q9NPP4 1024 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 CEP72Q9P209 647 aa11.18□□□□□ -0.62
HERC4-207ENST00000460168 A6NJR5 290 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 MAPK13O15264 365 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 MAGEB2O15479 319 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 ZSCAN12O43309 604 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 TBC1D8O95759 1140 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 GJB1P08034 283 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 MMEP08473 750 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 GARTP22102 1010 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 FECHP22830 423 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 KLRC1P26715 233 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 HNRNPH1P31943 449 aaKnown RBP11.17□□□□□ -0.62
HERC4-207ENST00000460168 GCKP35557 465 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.629e-6■■■■□ 23
HERC4-207ENST00000460168 FMO5P49326 533 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 FLT3LGP49771 235 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CDR1P51861 262 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 POLR2FP61218 127 aaKnown RBP11.17□□□□□ -0.62
HERC4-207ENST00000460168 PPFIA1Q13136 1202 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 TFDP1Q14186 410 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 KIF22Q14807 665 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 NYAP1Q6ZVC0 841 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 RRAGAQ7L523 313 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CBWD2Q8IUF1 395 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 DESI2Q9BSY9 194 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 KCND1Q9NSA2 647 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 ANKFY1Q9P2R3 1169 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 USP20Q9Y2K6 914 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 ZSWIM8A7E2V4 1837 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 EVPLQ92817 2033 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 COL1A2P08123 1366 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 A0A1B0GUA9 196 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 GTPBP10A4D1E9 387 aaKnown RBP11.17□□□□□ -0.62
HERC4-207ENST00000460168 LRRC53A6NM62 1247 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 SLC9A1P19634 815 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 PON1P27169 355 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 TMOD1P28289 359 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CPT1AP50416 773 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 DLG4P78352 724 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 APBA1Q02410 837 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CBWD6Q4V339 395 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CBWD3Q5JTY5 395 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CBWD5Q5RIA9 395 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CDCA2Q69YH5 1023 aaPredicted RBP11.17□□□□□ -0.62
HERC4-207ENST00000460168 RAD9BQ6WBX8 426 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 USP37Q86T82 979 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 GPD1LQ8N335 351 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 MIPOL1Q8TD10 442 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 ZNF668Q96K58 619 aaPredicted RBP11.17□□□□□ -0.62
HERC4-207ENST00000460168 PPP1R13BQ96KQ4 1090 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 CHP1Q99653 195 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 TARS2Q9BW92 718 aaKnown RBP11.17□□□□□ -0.62
HERC4-207ENST00000460168 EDEM3Q9BZQ6 932 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 AP5M1Q9H0R1 490 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 C2orf40Q9H1Z8 148 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 GABRQQ9UN88 632 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 PLAGL2Q9UPG8 496 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 AKT3Q9Y243 479 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 PPP2R2CQ9Y2T4 447 aa11.17□□□□□ -0.62
HERC4-207ENST00000460168 ASAP2O43150 1006 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 NOL4O94818 638 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 ADRB2P07550 413 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 ACTN1P12814 892 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 AKR1A1P14550 325 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 MYL7Q01449 175 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 SP3Q02447 781 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 PRKCZQ05513 592 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 CETN1Q12798 172 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 PTPN14Q15678 1187 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 GRIK4Q16099 956 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 MEA1Q16626 185 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 MAPK6Q16659 721 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 MFSD14CQ5VZR4 134 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 SLFN12LQ6IEE8 588 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 WDR59Q6PJI9 974 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 TMEM110Q86TL2 294 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 FAM81AQ8TBF8 368 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 CCDC127Q96BQ5 260 aa11.16□□□□□ -0.62
HERC4-207ENST00000460168 FAM213AQ9BRX8 229 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms