RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CYFIP1Q7L576 1253 aa14.54□□□□□ -0.08
TOP3B-213ENST00000457179 RNF10Q8N5U6 811 aaKnown RBP14.54□□□□□ -0.08
TOP3B-213ENST00000457179 RBM46Q8TBY0 533 aaKnown RBP14.54□□□□□ -0.08
TOP3B-213ENST00000457179 IQCDQ96DY2 449 aa14.54□□□□□ -0.08
TOP3B-213ENST00000457179 AZI2Q9H6S1 392 aa14.54□□□□□ -0.08
TOP3B-213ENST00000457179 ABCB4P21439 1286 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 PON1P27169 355 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 RNASELQ05823 741 aaKnown RBP14.53□□□□□ -0.08
TOP3B-213ENST00000457179 ADAT2Q7Z6V5 191 aaKnown RBP14.53□□□□□ -0.08
TOP3B-213ENST00000457179 PIGWQ7Z7B1 504 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 DCPSQ96C86 337 aaKnown RBP14.53□□□□□ -0.08
TOP3B-213ENST00000457179 KLRG1Q96E93 195 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 TRIM51Q9BSJ1 452 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 TRIM4Q9C037 500 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 GOLGA6L10A0A0M3HER8 536 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 ASAP2O43150 1006 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 LCA5LO95447 670 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 ALADP13716 330 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 YWHABP31946 246 aaKnown RBP14.53□□□□□ -0.08
TOP3B-213ENST00000457179 C1orf186Q6ZWK4 172 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 LONP2Q86WA8 852 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
TOP3B-213ENST00000457179 GABBR1Q9UBS5 961 aa14.53□□□□□ -0.08
TOP3B-213ENST00000457179 H0Y3Z8 333 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 LIN7AO14910 233 aaPredicted RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 LMNB1P20700 586 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 ANO7Q6IWH7 933 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 ALKBH5Q6P6C2 394 aaKnown RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 ATXN2LQ8WWM7 1075 aaKnown RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 POLR3CQ9BUI4 534 aaPredicted RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 NSRP1Q9H0G5 558 aaKnown RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 AS3MTQ9HBK9 375 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 LUC7LQ9NQ29 371 aaKnown RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 FGFR1OP2Q9NVK5 253 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 NKX1-2Q9UD57 310 aaPredicted RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 ASTN1O14525 1302 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 FOCADQ5VW36 1801 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 CALUO43852 315 aaPredicted RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 CCNE2O96020 404 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 HARSP12081 509 aaKnown RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 QARSP47897 775 aaKnown RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 EPHA7Q15375 998 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 TRIM74Q86UV6 250 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 TRIM73Q86UV7 250 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 FAM186BQ8IYM0 893 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 CEP170P1Q96L14 293 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 FAM210AQ96ND0 272 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 RPS6KC1Q96S38 1066 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 PXMP2Q9NR77 195 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 NOC2LQ9Y3T9 749 aaKnown RBP14.52□□□□□ -0.08
TOP3B-213ENST00000457179 CSADQ9Y600 493 aa14.52□□□□□ -0.08
TOP3B-213ENST00000457179 RGS16O15492 202 aaPredicted RBP14.52□□□□□ -0.09
TOP3B-213ENST00000457179 TGFB1I1O43294 461 aa14.52□□□□□ -0.09
TOP3B-213ENST00000457179 PGK2P07205 417 aa14.52□□□□□ -0.09
TOP3B-213ENST00000457179 COPS2P61201 443 aa14.52□□□□□ -0.09
TOP3B-213ENST00000457179 NAB2Q15742 525 aa14.52□□□□□ -0.09
TOP3B-213ENST00000457179 RNF220Q5VTB9 566 aa14.52□□□□□ -0.09
TOP3B-213ENST00000457179 LMNTD2Q8IXW0 634 aa14.52□□□□□ -0.09
TOP3B-213ENST00000457179 SYT15Q9BQS2 421 aa14.52□□□□□ -0.09
TOP3B-213ENST00000457179 AGO4Q9HCK5 861 aaKnown RBP14.52□□□□□ -0.09
TOP3B-213ENST00000457179 CHORDC1Q9UHD1 332 aaPredicted RBP14.52□□□□□ -0.09
TOP3B-213ENST00000457179 P4HBP07237 508 aaKnown RBP14.51□□□□□ -0.09
TOP3B-213ENST00000457179 MARK3P27448 753 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 RAD23BP54727 409 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 PPP2R5CQ13362 524 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 TMEM154Q6P9G4 183 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 HOOK3Q86VS8 718 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 CBWD1Q9BRT8 395 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 SPON1Q9HCB6 807 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 PITPNM2Q9BZ72 1349 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 RPL13P26373 211 aaKnown RBP14.51□□□□□ -0.09
TOP3B-213ENST00000457179 HSD17B4P51659 736 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 EDRF1Q3B7T1 1238 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 MTERF2Q49AM1 385 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 FBF1Q8TES7 1133 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 TLCD1Q96CP7 247 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 FMO2Q99518 471 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 PPP1R12CQ9BZL4 782 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 VPS33BQ9H267 617 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 LMCD1Q9NZU5 365 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 DLGAP2Q9P1A6 1054 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 SEPT9Q9UHD8 586 aaPredicted RBP14.51□□□□□ -0.09
TOP3B-213ENST00000457179 RPS6KL1Q9Y6S9 549 aa14.51□□□□□ -0.09
TOP3B-213ENST00000457179 COPB2P35606 906 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 RFC5P40937 340 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 PRPF4BQ13523 1007 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 SUPT20HL1Q3ZLR7 823 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 OTUD6AQ7L8S5 288 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 IRF2BP2Q7Z5L9 587 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 DAAM2Q86T65 1068 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 SLC35C1Q96A29 364 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 IFT74Q96LB3 600 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 LBHD1Q9BQE6 289 aaPredicted RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 LARSQ9P2J5 1176 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 FRMD4BQ9Y2L6 1034 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 QSER1Q2KHR3 1735 aa14.5□□□□□ -0.09
TOP3B-213ENST00000457179 PGRMC1O00264 195 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 DHX15O43143 795 aaKnown RBP14.5□□□□□ -0.09
TOP3B-213ENST00000457179 RNF8O76064 485 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms