RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TNMDQ9H2S6 317 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 SLC38A7Q9NVC3 462 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 MARCH5Q9NX47 278 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 BARX2Q9UMQ3 279 aaPredicted RBP19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 EXOC7Q9UPT5 735 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 PCDHB13Q9Y5F0 798 aa19.75■□□□□ 0.75
PDLIM2-215ENST00000456545 SMIM28A0A1B0GU29 152 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 GRXCR2A6NFK2 248 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 SPDYE4A6NLX3 237 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 CLASP2O75122 1294 aaKnown RBP19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 CLTAP09496 248 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 KLRC2P26717 231 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 GLUD2P49448 558 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 USP41Q3LFD5 358 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 RESP18Q5W5W9 173 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 SLFN12LQ6IEE8 588 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 FUT10Q6P4F1 479 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 PPFIBP1Q86W92 1011 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 CEP57L1Q8IYX8 460 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 HASPINQ8TF76 798 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 CASP10Q92851 521 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 HVCN1Q96D96 273 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 MSTO1Q9BUK6 570 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 HERC2P3Q9BVR0 1158 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 VN1R3Q9BXE9 311 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 SCAND2PQ9GZW5 306 aaPredicted RBP19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 CXCL16Q9H2A7 254 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 ST6GALNAC4Q9H4F1 302 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 CACNG4Q9UBN1 327 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 IRAK3Q9Y616 596 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 REV3LO60673 3130 aa19.74■□□□□ 0.75
PDLIM2-215ENST00000456545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 F8W810 466 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 TULP1O00294 542 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 ABLIM1O14639 778 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 IL9P15248 144 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 ASIC1P78348 528 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 NUCB2P80303 420 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 RBM10P98175 930 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 PTPN14Q15678 1187 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 STXBP4Q6ZWJ1 553 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 TAS1R1Q7RTX1 841 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 MAP4K3Q8IVH8 894 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 SYCP3Q8IZU3 236 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 LEO1Q8WVC0 666 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 KCNN1Q92952 543 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 UROC1Q96N76 676 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 ACCSQ96QU6 501 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 PAAF1Q9BRP4 392 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 RPF1Q9H9Y2 349 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 MAGEF1Q9HAY2 307 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 CLEC1BQ9P126 229 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 KCNH3Q9ULD8 1083 aa19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 SF3B1O75533 1304 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM2-215ENST00000456545 OGTO15294 1046 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 MBTPS2O43462 519 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 GLP2RO95838 553 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 PIGRP01833 764 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 ELAVL2Q12926 359 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 SMAD4Q13485 552 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 ALCAMQ13740 583 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 E2F4Q16254 413 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 ADALQ6DHV7 355 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 DCLRE1AQ6PJP8 1040 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 ALKAL1Q6UXT8 129 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 CEP57Q86XR8 500 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 FAM212AQ96EL1 285 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 DDX27Q96GQ7 796 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 SNX27Q96L92 541 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 NECAB3Q96P71 396 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 KLHL5Q96PQ7 755 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 PPP1R10Q96QC0 940 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 FIZ1Q96SL8 496 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 GPR62Q9BZJ7 368 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 KBTBD4Q9NVX7 518 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 HCFC2Q9Y5Z7 792 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 TRIP11Q15643 1979 aa19.72■□□□□ 0.75
PDLIM2-215ENST00000456545 B3GAT3O94766 335 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 KCNE1P15382 129 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 CLCNKBP51801 687 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 PPP2R3AQ06190 1150 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 COASYQ13057 564 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 POSTNQ15063 836 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 SLC10A6Q3KNW5 377 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 FAM171A1Q5VUB5 890 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 ANKRD54Q6NXT1 300 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 TMEM184AQ6ZMB5 413 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 RIN2Q8WYP3 895 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 MSLNLQ96KJ4 702 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 APOL5Q9BWW9 433 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 PLEKHA5Q9HAU0 1116 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 OLFML3Q9NRN5 406 aa19.71■□□□□ 0.75
PDLIM2-215ENST00000456545 UNC80Q8N2C7 3258 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 CITO14578 2027 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 ANKRD63C9JTQ0 380 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 TNFRSF10AO00220 468 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 TRAPPC3O43617 180 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 KIF4AO95239 1232 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 ADH1AP07327 375 aa19.7■□□□□ 0.74
PDLIM2-215ENST00000456545 CNPP09543 421 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms