RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 CENPCQ03188 943 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RESTQ13127 1097 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PTGES3Q15185 160 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 UGT3A1Q6NUS8 523 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ANKRD13AQ8IZ07 590 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 MEIS3Q99687 375 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CCT7Q99832 543 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PARD6BQ9BYG5 372 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 C2orf40Q9H1Z8 148 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CPSF3Q9UKF6 684 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PCDHA4Q9UN74 947 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 MAGI3Q5TCQ9 1506 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 DNAJA2O60884 412 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TNFRSF8P28908 595 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 GMFBP60983 142 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TCP11X2Q5H9J9 407 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 NUDCD3Q8IVD9 361 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ZBTB38Q8NAP3 1195 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 MAML1Q92585 1016 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 SAR1AQ9NR31 198 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PNMA3Q9UL41 463 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 NR4A1P22736 598 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 KRT76Q01546 638 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TRIP4Q15650 581 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 EZH2Q15910 746 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 SWT1Q5T5J6 900 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 CCDC33Q8N5R6 958 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 RTL3Q8N8U3 475 aaKnown RBP5.49□□□□□ -1.53
CSMD3-204ENST00000455883 NDST4Q9H3R1 872 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 PSTPIP2Q9H939 334 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 TBC1D22BQ9NU19 505 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 ZFATQ9P243 1243 aa5.49□□□□□ -1.53
CSMD3-204ENST00000455883 NRKQ7Z2Y5 1582 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ZC3H11AO75152 810 aaKnown RBP eCLIP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ATP1A2P50993 1020 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 GPC5P78333 572 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 RAPH1Q70E73 1250 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CARD14Q9BXL6 1004 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 BTBD7Q9P203 1132 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 MYO18BQ8IUG5 2567 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 GHRP10912 638 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CD19P15391 556 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ANO4Q32M45 955 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PMF1Q6P1K2 205 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 RASSF3Q86WH2 238 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 LINC00301Q8NCQ3 95 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FSD1LQ9BXM9 530 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 COMMD3-BMI1R4GMX3 469 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PRPF3O43395 683 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 RGS20O76081 388 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 NPR3P17342 541 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PIK3CBP42338 1070 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CAPZA2P47755 286 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ARFIP2P53365 341 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ITGA9Q13797 1035 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 GPR141Q7Z602 305 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FAM45AQ8TCE6 357 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CENPTQ96BT3 561 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 VCPIP1Q96JH7 1222 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FANCLQ9NW38 375 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 IFT172Q9UG01 1749 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 OVOS2A0A0J9YW53 1432 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 OVOS2Q6IE36 1432 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 IGHDP01880 384 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 HMOX2P30519 316 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 KCNH2Q12809 1159 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 WASHC2DQ5SRD0 308 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 KDM7AQ6ZMT4 941 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ZNF557Q8N988 423 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 DNAAF3Q8N9W5 541 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 KCTD6Q8NC69 237 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PDPRQ8NCN5 879 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ARMC7Q9H6L4 198 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PAPOLBQ9NRJ5 636 aaKnown RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 TTC7AQ9ULT0 858 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 H0YJX3 145 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PEX1O43933 1283 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 COPAP53621 1224 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ALX1Q15699 326 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FAM160B2Q86V87 743 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 L2HGDHQ9H9P8 463 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 ITM2BQ9Y287 266 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CADP27708 2225 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 A0A0B4J269 797 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CCT8L1PA6NM43 557 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 MAFGO15525 162 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 GNAT1P11488 350 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 GUCY2FP51841 1108 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 TUBB3Q13509 450 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 RCN2Q14257 317 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 PCBP1Q15365 356 aaKnown RBP eCLIP5.48□□□□□ -1.53
CSMD3-204ENST00000455883 DEPDC1Q5TB30 811 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 TAF2Q6P1X5 1199 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 BARGINQ6ZT62 677 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 POMGNT1Q8WZA1 660 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 HPS1Q92902 700 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 CCNB1IP1Q9NPC3 277 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 LEMD3Q9Y2U8 911 aa5.48□□□□□ -1.53
CSMD3-204ENST00000455883 FHOD1Q9Y613 1164 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms