RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 PRSS50Q9UI38 385 aa3.28□□□□□ -1.88
LINC02540-201ENST00000455554 LCHNA4D1U4 455 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 CXorf49A8MYA2 514 aaPredicted RBP3.27□□□□□ -1.89
LINC02540-201ENST00000455554 WNT10BO00744 389 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 CELA2AP08217 269 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 SNRPA1P09661 255 aaKnown RBP3.27□□□□□ -1.89
LINC02540-201ENST00000455554 FGFR4P22455 802 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 CRHR1P34998 444 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 EZH2Q15910 746 aaKnown RBP3.27□□□□□ -1.89
LINC02540-201ENST00000455554 SRSF7Q16629 238 aaKnown RBP eCLIP3.27□□□□□ -1.89
LINC02540-201ENST00000455554 FAM47AQ5JRC9 791 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 GPR158Q5T848 1215 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 GRASPQ7Z6J2 395 aaPredicted RBP3.27□□□□□ -1.89
LINC02540-201ENST00000455554 PDPRQ8NCN5 879 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 OR14C36Q8NHC7 312 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 HASPINQ8TF76 798 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 ZNF480Q8WV37 535 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 CHTF18Q8WVB6 975 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 PTCD3Q96EY7 689 aaKnown RBP3.27□□□□□ -1.89
LINC02540-201ENST00000455554 WNT8AQ9H1J5 351 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 KCNE5Q9UJ90 142 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 TMPRSS11EQ9UL52 423 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 PPP2R3BQ9Y5P8 575 aa3.27□□□□□ -1.89
LINC02540-201ENST00000455554 MANSC4A6NHS7 340 aaPredicted RBP3.26□□□□□ -1.89
LINC02540-201ENST00000455554 E9PSI1 815 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 TGM5O43548 720 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 ONECUT2O95948 504 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 F2P00734 622 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 SDSP20132 328 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 GPD1P21695 349 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 CTSSP25774 331 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 CANXP27824 592 aaKnown RBP3.26□□□□□ -1.89
LINC02540-201ENST00000455554 RAP2BP61225 183 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 CYP2A13Q16696 494 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 KIF18BQ86Y91 864 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 LYSMD2Q8IV50 215 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 SLC41A1Q8IVJ1 513 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 DRC7Q8IY82 874 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 LNX2Q8N448 690 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 DPF1Q92782 380 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 MKL1Q969V6 931 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 NACC2Q96BF6 587 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 SARAFQ96BY9 339 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 ZBTB9Q96C00 473 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 TIMP4Q99727 224 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 UNKLQ9H9P5 680 aaKnown RBP3.26□□□□□ -1.89
LINC02540-201ENST00000455554 CPNE5Q9HCH3 593 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 THG1LQ9NWX6 298 aaKnown RBP3.26□□□□□ -1.89
LINC02540-201ENST00000455554 ENTPD2Q9Y5L3 495 aa3.26□□□□□ -1.89
LINC02540-201ENST00000455554 PNPLA7Q6ZV29 1317 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 ADCY6O43306 1168 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 ORC4O43929 436 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 PEX1O43933 1283 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 GPANK1O95872 356 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 BMP15O95972 392 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 WT1P19544 449 aaPredicted RBP3.25□□□□□ -1.89
LINC02540-201ENST00000455554 PTPN7P35236 360 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 VAV2P52735 878 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 MANFP55145 182 aaKnown RBP3.25□□□□□ -1.89
LINC02540-201ENST00000455554 PHC1P78364 1004 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 HSD11B2P80365 405 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 DSG1Q02413 1049 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 TRIM25Q14258 630 aaKnown RBP3.25□□□□□ -1.89
LINC02540-201ENST00000455554 RRP12Q5JTH9 1297 aaKnown RBP3.25□□□□□ -1.89
LINC02540-201ENST00000455554 COLGALT2Q8IYK4 626 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 NXPE1Q8N323 547 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 ZNF610Q8N9Z0 462 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 MS4A5Q9H3V2 200 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 PRDM12Q9H4Q4 367 aa3.25□□□□□ -1.89
LINC02540-201ENST00000455554 MTO1Q9Y2Z2 717 aaKnown RBP3.25□□□□□ -1.89
LINC02540-201ENST00000455554 ZNF891A8MT65 544 aaPredicted RBP3.24□□□□□ -1.89
LINC02540-201ENST00000455554 PRKCGP05129 697 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 GCSHP23434 173 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 LSP1P33241 339 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 PTGER1P34995 402 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 KPNA1P52294 538 aaPredicted RBP3.24□□□□□ -1.89
LINC02540-201ENST00000455554 FOXR2Q6PJQ5 311 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 ZNF572Q7Z3I7 529 aaPredicted RBP3.24□□□□□ -1.89
LINC02540-201ENST00000455554 TRMT2AQ8IZ69 625 aaKnown RBP3.24□□□□□ -1.89
LINC02540-201ENST00000455554 REPS2Q8NFH8 660 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 SSH3Q8TE77 659 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 ARMC5Q96C12 935 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 PAWRQ96IZ0 340 aaKnown RBP3.24□□□□□ -1.89
LINC02540-201ENST00000455554 ANO3Q9BYT9 981 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 MAGEC2Q9UBF1 373 aaPredicted RBP3.24□□□□□ -1.89
LINC02540-201ENST00000455554 USP25Q9UHP3 1055 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 CDY2AQ9Y6F7 541 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 AATKQ6ZMQ8 1374 aa3.24□□□□□ -1.89
LINC02540-201ENST00000455554 ZNF804BA4D1E1 1349 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 TTBK1Q5TCY1 1321 aaPredicted RBP3.23□□□□□ -1.89
LINC02540-201ENST00000455554 RPTORQ8N122 1335 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 LOC105371045A0A1W2PR82 267 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 CCDC151A5D8V7 595 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 TRIM38O00635 465 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 PPP1R12AO14974 1030 aaPredicted RBP3.23□□□□□ -1.89
LINC02540-201ENST00000455554 KPNA6O60684 536 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 IGSF3O75054 1194 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 PHF2O75151 1096 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 IGKV2-30P06310 120 aa3.23□□□□□ -1.89
LINC02540-201ENST00000455554 ITPKBP27987 946 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms